Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1789 |
Symbol | |
ID | 4184685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 2098080 |
End bp | 2098748 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071788 |
Product | hypothetical protein |
Protein accession | YP_678398 |
Protein GI | 110638189 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.082987 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAACA TTGCGTTGAT TGCAGGAGCT TCCGGATTAG TAGGAAATGC ATTAATCTCA CTTTTACTTG AAGGGGAGCA TTATTCAAAA GTCATATCGC TTCAGCGTGG ACATGCTTTA CTGGAGCATC CAAAGCTCGT TACCATACAA ACAGATTTTA ATAATCTGCA GCAACTGGAT GTTCCTCCGT TAACGGATGT GTTTTGCTGC TTAGGTACAA CCATTAAAAA GGCCGGCAGC AAAGAACAGT TTAAACGTGT CGATTTTCAA TATCCATTAG ATCTTGCTCA TCTGGCAATC AAATCCGGAG CTTCACACTT CCTGATCATT ACAGCCATGG GAGCGGATGA AAAATCATTC TTCTTTTATA ATCAGGTGAA AGGAGAAATT GAAAACCGCT TATCAGCATT AACTACCCTG CCGCGTTTGT CTATTATCCG GCCGTCATTA TTACTGGGCC AGAGAAAAGA AAAATGCCTG GGAGAAGGCA TCGGATCGTT TTTGGCAACA GTATTGAATC CGCTTATGAA AGGGAGCCTC AAAAAATATC AGGGTATACA GGCAACAGAT GTTGCAAAAG CAATGTACCG TATTGCAACC AGCATAGCTG GCAACGGCAT TACCGTTTAT CCTTCAGATG AATTAAAAAA CATATCAACC CCTGTATAA
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Protein sequence | MSNIALIAGA SGLVGNALIS LLLEGEHYSK VISLQRGHAL LEHPKLVTIQ TDFNNLQQLD VPPLTDVFCC LGTTIKKAGS KEQFKRVDFQ YPLDLAHLAI KSGASHFLII TAMGADEKSF FFYNQVKGEI ENRLSALTTL PRLSIIRPSL LLGQRKEKCL GEGIGSFLAT VLNPLMKGSL KKYQGIQATD VAKAMYRIAT SIAGNGITVY PSDELKNIST PV
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