| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1704 |
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| Symbol | relA |
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| ID | 4185480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 2003487 |
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| End bp | 2005685 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638071702 |
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| Product | GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase) |
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| Protein accession | YP_678313 |
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| Protein GI | 110638104 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0084674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.280503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGTTG ATGTTGAAAA GGAGAATAAA GAAATAATAA AAAGATACCG TGCATTGCTT
CATGCAGCAA AACCTATTTT AAAAGATGGG GATGCTAAAA TTATAAAAAA AGCATTTTTT
ACATCGGTAC AGGCGCATAA AGATATGCGT CGGAAATCCG GTGAGCCATA TATATATCAT
CCATTAGCAG TTGCTCAGAT TGCAGTTGAA GAAATTGGTT TGGGTACAAC ATCCATCGTT
GCGGCCTTGC TGCACGATGT GGTAGAAGAT ACACACCTGG AACTGAGGGA TCTGGAAAGG
GATTTTGGCC CAAAGGTTGC TACCATCATC GACGGGCTTA CTAAAATCTC CGGTGTCTTC
GAACACGGAA GTTCGCAGCA GGCAGAAAAT TTCAGAAAAA TGATCCTTAC ACTTTCAGAA
GATGTACGGG TTATTCTGGT AAAGCTTGCC GACCGTTTAC ACAACATGCG TACATTAGAA
AGCATGCCGC GTGATAAACA GCTGAAAATT GCTTCGGAAA CCATGTATTT ATATGCACCT
CTGGCGCACC GCCTGGGTTT ATATGCCATC AAATCTGAAC TTGAAGATCT GTATTTAAAA
TATACGGATA CCGACCGCTA TAATTTTATA GCCGATAAAG TTGCCAAATC AGATGCTGCA
CGTGAAAAAA CAACAAAAGA TTTCGCAGCT CCTCTGGAAA TACCACTCAA ACGTGCCGGC
CTTAAATTCA AAATCAAAGG GCGCACAAAA TCTATTTATT CCATTCATCA GAAAATGCAG
CAGCAGAATA TACCTTTTGA AGAGGTCTAT GATTTGTTTG CCATCCGCTT AATTCTGGAA
GCCGATCTGG CCGAAGAAAA AAGTGTTTGC TGGAAAGCTT ATTCAATCGT TACCGATTTT
TATAAACCAA ATCCGGATCG CTTAAAGGAC TGGGTGAGTA CGCCAAAAGC AAATGGCTAC
GAATCGCTGC ACACAACGGT TATGAGTAAA TCCGGACAAT GGGTGGAAGT GCAGATCCGT
ACCAGGCGTA TGGATGATAT TGCCGAAAAA GGATATGCGG CACACTGGAA ATACAAAGAA
AATAAAACGA CGACTAAAGA GCACGGTATT GAAGACTGGA TCCGTAAAGT TCGGGAACTG
ATTGAAAATA ACGACTTCTC AGCCATAGAA TTTGTCAACG AATTCAGACA GAATTTATTC
AGCGAAGAGG TGTTTGTGTT TACACCTAAA GGCGATTTAA AAACGCTGCA ATTCGGCGCA
ACAGCACTGG ATTTTGCCTT TGAGATCCAC ACAAAGATCG GCGAACACTG TCTTGGCGCA
AAAGTGAACC AAAAACTGGT ACCGTTGAGT TATCAGTTAA ATAACGGCGA CCAGATTGAA
ATATTAACCT CAGGCAAACA AAAACCTTCA GAAGATTGGC TGAAGTTTGT TGTTACATCG
AAGGCCCGTA CAAAAATCAA GGAATCGCTT AAAGAAGAAA AGAAGATTAT TGCACAGGAT
GGTAAGGCAA TGGTAGAACG TAAGCTGAGC CATTTGAAAA TACCATTGAA TAATGAAACA
ATCAACAAAA TGTTATTACT CTTTAATGTG AAAACACCTT TAGAGTTTTA TTATAATGTT
GCTAAAGACA TTATTCCGCC CAGCCAGCTG AAACGCTTAA AAGATCCGGA AAAGAAACCG
GAACCTTCCA AACGTCCGGT TGAAGTAGAT CCGGATAAAA AATCAACATC GGTAAAAGTT
TCCGATAAAG ATATGGTTTT GATCGGTGAC GGCATGGACA AAATCGATTA CAACCTGGCA
AAATGTTGTA ACCCGATTCC CGGAGATGAA GTGTTCGGCT TCGTAACGGT AAGTGAGGGC
ATCAAGATCC ACCGCACCAA TTGCCCGAAT GCAGTAGAAT TAATGTCACA ATATGGTTAC
CGGATTGTAA AAGCAAAATG GACGTCTCAG AAAGAACTTG CTTTCTTAAC CGGGTTAAAA
ATTGTAGGTG CCGATCGGGT AGGCATTATA AACGATGTTA CCAAAGTGAT CTCCACACAG
CTGAAAGTAA ATATCCGTTC TATTACCATT GACACCGACG ATGGTATCTT TGAAGGTACC
ATGATGGTAT TTGTAAACGA TACAGAACAT CTGAACACCC TCATTTCCAA GCTAAAAGAA
ATTTCAGACA TTATTAGCGT GTCTCGTATA AACAGTTGA
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| Protein sequence | MVVDVEKENK EIIKRYRALL HAAKPILKDG DAKIIKKAFF TSVQAHKDMR RKSGEPYIYH
PLAVAQIAVE EIGLGTTSIV AALLHDVVED THLELRDLER DFGPKVATII DGLTKISGVF
EHGSSQQAEN FRKMILTLSE DVRVILVKLA DRLHNMRTLE SMPRDKQLKI ASETMYLYAP
LAHRLGLYAI KSELEDLYLK YTDTDRYNFI ADKVAKSDAA REKTTKDFAA PLEIPLKRAG
LKFKIKGRTK SIYSIHQKMQ QQNIPFEEVY DLFAIRLILE ADLAEEKSVC WKAYSIVTDF
YKPNPDRLKD WVSTPKANGY ESLHTTVMSK SGQWVEVQIR TRRMDDIAEK GYAAHWKYKE
NKTTTKEHGI EDWIRKVREL IENNDFSAIE FVNEFRQNLF SEEVFVFTPK GDLKTLQFGA
TALDFAFEIH TKIGEHCLGA KVNQKLVPLS YQLNNGDQIE ILTSGKQKPS EDWLKFVVTS
KARTKIKESL KEEKKIIAQD GKAMVERKLS HLKIPLNNET INKMLLLFNV KTPLEFYYNV
AKDIIPPSQL KRLKDPEKKP EPSKRPVEVD PDKKSTSVKV SDKDMVLIGD GMDKIDYNLA
KCCNPIPGDE VFGFVTVSEG IKIHRTNCPN AVELMSQYGY RIVKAKWTSQ KELAFLTGLK
IVGADRVGII NDVTKVISTQ LKVNIRSITI DTDDGIFEGT MMVFVNDTEH LNTLISKLKE
ISDIISVSRI NS
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