| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1616 |
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| Symbol | fecI |
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| ID | 4187092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1896510 |
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| End bp | 1897064 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071609 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_678226 |
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| Protein GI | 110638019 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0618359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0178191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAATA GTCAGGAAGC ACACATAGAA CAGGTTTTTA AAAACCAACG CGGAGGCCTG
TTAGGTTTTA TCCGCAAGCG TGTATCCCGG CTGGAAGACG CAGAAGATAT TCTGCAGGAT
GTATTCTTTC AATTTGTTTC TGCTTATGAT AGCATTGAAT CAATTGATAA AGTTAGTTCA
TGGTTATTTT CTGTTGCGCG TAACAAAATA ACCGATCGCT ATCGGAAGAA GAAGCCTGAA
GCATGGTCTG ATCTGGGATT TCAGGGGAAA AATGAAGATT CGGAAATGTT GATGCTGGAA
GATATTCTTC CGGATTTTAA AAATACTCCG GAAGATGTTT ATGCACGCAA CGTAATCTGG
GAAGCAATAG AGGTAGCCAT GGCTGAAATG CCGGCAGAAC AAAGACAGGT AATGTTATTA
CATGAATTTG AAGATAAGTC GTTTAAAGAA ATAAGTGAAA TTACAGGTGT TAGTGTAAAT
ACACTGCTGT CAAGAAAACG GTATGCAATC TTAACACTTA GAAAAAAATT ACAGGAATTG
TATGATGAAT TATAG
|
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| Protein sequence | MANSQEAHIE QVFKNQRGGL LGFIRKRVSR LEDAEDILQD VFFQFVSAYD SIESIDKVSS
WLFSVARNKI TDRYRKKKPE AWSDLGFQGK NEDSEMLMLE DILPDFKNTP EDVYARNVIW
EAIEVAMAEM PAEQRQVMLL HEFEDKSFKE ISEITGVSVN TLLSRKRYAI LTLRKKLQEL
YDEL
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