| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1574 |
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| Symbol | |
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| ID | 4185608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1848707 |
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| End bp | 1850014 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638071568 |
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| Product | protoporphyrinogen oxidase |
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| Protein accession | YP_678185 |
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| Protein GI | 110637978 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.304554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.228585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCAA TTATTGGTGC AGGCATTTCA GGATTAACAC TTGCGTATCA GCTTCAACAA
GCTGGCAAGC CTTATATATT ATTTGAATCT AACTCACGAC CAGGCGGTTA TATTAATTCT
CAACGATTTG GTAAATACCT GTTAGAGGTA GGTCCCAACT CTATTCTGGT TGATAAAAAA
TTAGAGGAAT TTATTCACGA ATTGAATCTG GATAAATTAT TTGAACCGGC AGCCATCATC
AATAAAAACA GATTTATCTA TAAAGATGCT AACATACAGC AAGTACCTTC CGGACCGCTG
TCTTTTTTAA CAGGACGTTT TTTTTCAGCA AAAACGAAGT ATGCAATATT CAAAGAGCTT
TTTAATAAAA GTATATCGAA AGAAAATGAA ACGGTATACG ATTTCTTTGC CCGAAGATTT
TCTGCGCCCT TTACGCAGTA TACCATCGAT CCGTTTGCTA CCGGAGTCTA TGCAGGTGAC
ATTAAACAGC TTTTAATAGA AGAAACATTT CCACAGCTGG TTGAATTGGA AAAACAATAC
GGCAGCATCA TTAAAGGAAT CTTCAAAAAA GGTTTTGGCG AAAAAAGAAA AACCGGCACA
TTTGTGCATG GCTTGCAAAC ACTTACAGAT ACACTGGCTG CACAGCTTCA TTCCCTTCAG
CTTAATACAC GTGTATTGAA TCTCCGTAAA CAGATGGATA AGATTGTGCT AACCACGGAT
ACGAAACATG GTATTGAAGA ATTAACGTTT GATAAAGTTG TTGTTTGCGG AACAACTTTT
CAGGCGGCTA CATTGATCAA AGATTCCTAT CCGGATCTTT CAGCCATACT TTCACAGGTA
CAATATGCTT CTATGAAGGC TGTGTTTGCT GCCTTTAAGC GTACTGATGT AACACATCCG
ATGAATGGAT TCGGATGTTT ATATCCCTCT GCAGAGCAAT CTTTTTTAGC TGGTACCATT
TGGAACAGCA GCATTTTTAA CGATCGCTGT CCGGCCGATG AAGTACTGAC AACGTCATTC
ATCGGCGGCA TGCATCACCC GGAGTATACA GCGCTTTCAG AATCAGAACT AGAACAACGC
GCCATACAGC AGTTAAGCAA AGATCTTGGG ATTACAGGCA AACCAACGTT TACACACGTA
GCCGGCTGGA ACAAAGCCAT TCCGCAATAC GACATCTATT TAAAAAAGGC ACGTCTTGCA
AGTAAGCTGT TGAGCGATGA TCATATTTAC TTCCGTTCAA ACTGGACAAA CGGAATTTCT
TTAGGCAATT GCATACAAAG TGCCCGTGAT TTAGCGTTGA TTTTATAA
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| Protein sequence | MIAIIGAGIS GLTLAYQLQQ AGKPYILFES NSRPGGYINS QRFGKYLLEV GPNSILVDKK
LEEFIHELNL DKLFEPAAII NKNRFIYKDA NIQQVPSGPL SFLTGRFFSA KTKYAIFKEL
FNKSISKENE TVYDFFARRF SAPFTQYTID PFATGVYAGD IKQLLIEETF PQLVELEKQY
GSIIKGIFKK GFGEKRKTGT FVHGLQTLTD TLAAQLHSLQ LNTRVLNLRK QMDKIVLTTD
TKHGIEELTF DKVVVCGTTF QAATLIKDSY PDLSAILSQV QYASMKAVFA AFKRTDVTHP
MNGFGCLYPS AEQSFLAGTI WNSSIFNDRC PADEVLTTSF IGGMHHPEYT ALSESELEQR
AIQQLSKDLG ITGKPTFTHV AGWNKAIPQY DIYLKKARLA SKLLSDDHIY FRSNWTNGIS
LGNCIQSARD LALIL
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