Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1562 |
Symbol | |
ID | 4185732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1831611 |
End bp | 1832390 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638071556 |
Product | SAM-dependent methyltransferase |
Protein accession | YP_678173 |
Protein GI | 110637966 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.595614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGA TTATTCGTTT TGCTATCCGT AAAATTCCGC GTAAGTATTT ACAGATTGTA AGTCCGGTTG CCATGAAAGC CATGAAGTTG GTTTACAGAG GAAATGCCGT TGAGTGTCCG GTGTGTAACA GCACATTTTC AAAAATGCTT CCCTATGGAA GAATTGTAAG CAGAGAAAAT GCCTTGTGTC CGGAATGCTT ATCGTTGGAA AGACATCGGT TGATGTGGTT GTTCTTAAAA AACAAAACAG ATTTCTTTAC TGCCAACATA AAACTGTTAC ATATTGCTCC GGAGCATTGT TTTATTGATC GTTTTGAAAA GTTAAAAAAC ATTAACTATA TCACGGCTGA TATTGAATCA CCTCTGGCAA AAGTAAAAAT GGATGTACAT GACATTCCAT TTGAAGCAAA CACATTTGAT GTTGTTTTCT GTAACCATGT GCTTGAACAT GTTGACAACG ATATCAGAGC AATGGAAGAA ATGCTGCGGG TATTAAAGCC GGGCCGCTGG GCAATTCTGC AAAGCCCGAT TGATCCTGCA CGTGCGGAAA CATTTGAAGA TCCTACCATT ACAGATCCGG CAGAAAGAGA ACGTGTACAT GGCCAGGATG ACCACATGCG CACCTATGGC CTTGATTATG GCAATCGCAT CAAACGTTCC GGTTTCCTTG TTACAGAAAG CATGTATGTA AAAGAACTTC CGGCTGAACT GGTAAAAAGA TATTGCTTGC CTGGGGATGA AATAATTTAT TTTTGCGAGA AAGCCCGGCA AATAGTGTAG
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Protein sequence | MKEIIRFAIR KIPRKYLQIV SPVAMKAMKL VYRGNAVECP VCNSTFSKML PYGRIVSREN ALCPECLSLE RHRLMWLFLK NKTDFFTANI KLLHIAPEHC FIDRFEKLKN INYITADIES PLAKVKMDVH DIPFEANTFD VVFCNHVLEH VDNDIRAMEE MLRVLKPGRW AILQSPIDPA RAETFEDPTI TDPAERERVH GQDDHMRTYG LDYGNRIKRS GFLVTESMYV KELPAELVKR YCLPGDEIIY FCEKARQIV
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