Gene CHU_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1562 
Symbol 
ID4185732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1831611 
End bp1832390 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content41% 
IMG OID638071556 
ProductSAM-dependent methyltransferase 
Protein accessionYP_678173 
Protein GI110637966 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.595614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGA TTATTCGTTT TGCTATCCGT AAAATTCCGC GTAAGTATTT ACAGATTGTA 
AGTCCGGTTG CCATGAAAGC CATGAAGTTG GTTTACAGAG GAAATGCCGT TGAGTGTCCG
GTGTGTAACA GCACATTTTC AAAAATGCTT CCCTATGGAA GAATTGTAAG CAGAGAAAAT
GCCTTGTGTC CGGAATGCTT ATCGTTGGAA AGACATCGGT TGATGTGGTT GTTCTTAAAA
AACAAAACAG ATTTCTTTAC TGCCAACATA AAACTGTTAC ATATTGCTCC GGAGCATTGT
TTTATTGATC GTTTTGAAAA GTTAAAAAAC ATTAACTATA TCACGGCTGA TATTGAATCA
CCTCTGGCAA AAGTAAAAAT GGATGTACAT GACATTCCAT TTGAAGCAAA CACATTTGAT
GTTGTTTTCT GTAACCATGT GCTTGAACAT GTTGACAACG ATATCAGAGC AATGGAAGAA
ATGCTGCGGG TATTAAAGCC GGGCCGCTGG GCAATTCTGC AAAGCCCGAT TGATCCTGCA
CGTGCGGAAA CATTTGAAGA TCCTACCATT ACAGATCCGG CAGAAAGAGA ACGTGTACAT
GGCCAGGATG ACCACATGCG CACCTATGGC CTTGATTATG GCAATCGCAT CAAACGTTCC
GGTTTCCTTG TTACAGAAAG CATGTATGTA AAAGAACTTC CGGCTGAACT GGTAAAAAGA
TATTGCTTGC CTGGGGATGA AATAATTTAT TTTTGCGAGA AAGCCCGGCA AATAGTGTAG
 
Protein sequence
MKEIIRFAIR KIPRKYLQIV SPVAMKAMKL VYRGNAVECP VCNSTFSKML PYGRIVSREN 
ALCPECLSLE RHRLMWLFLK NKTDFFTANI KLLHIAPEHC FIDRFEKLKN INYITADIES
PLAKVKMDVH DIPFEANTFD VVFCNHVLEH VDNDIRAMEE MLRVLKPGRW AILQSPIDPA
RAETFEDPTI TDPAERERVH GQDDHMRTYG LDYGNRIKRS GFLVTESMYV KELPAELVKR
YCLPGDEIIY FCEKARQIV