| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1558 |
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| Symbol | |
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| ID | 4185728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1826303 |
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| End bp | 1827862 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638071552 |
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| Product | outer membrane protein |
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| Protein accession | YP_678169 |
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| Protein GI | 110637962 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.335417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCATTA CACCACTAAA AGTTTCAGCA CAGGTATCTT CTTCTCGTTC TGAAACTGAG
TCTGTTGCTC ATACAGCTTT TACAAATCAG GATTATTATC ACGCGTTACC CTTATATCTT
CATCTGGATA GTTTATATCC AAACGTGCCC AAATATATGT TCCCTATTGG TGTTAGTTAC
ATTAACACAA CCGGTGATCA GAAAAAAGCA TTGGTGTATT TAGAGAAATG TAAATTAAAA
CCGAATCAAT ACCCGCCCAC ATTACATTAT TATTTAGGCA GGGCATACCA TTTAGATTAT
CGCTTCGATG ATGCTATTGT AGAATTCGAT GTTTGTCTTT CGCATTTATA TAAAGCGAAA
TCAAAAAATG CGTTGATTAT TAAAGATATT TATAGAGAAA TTGAGATGTG TGAGAATGGA
AAGAAAATTG TTCAAACACC TATTGTTATT GACATAGAAA ATTTAGGCCC TGAAATTAAC
AGTTCATATG CCGAATACGG CCCTGTACTT ACACTGGATG AAAAAGAAAT TATCTTTACT
TCCTGCAGAC CCGAAACGAC AGGCGGAATG ATTGATCCGG AAGATGGATT ATTTTTTGAA
GACGTTTATA TTTCTTCAAA AAAAGGTTCC GTATGGCAGA AAGCGTTAAA TATGGGACCT
GCTATCAATA CAAACGGCCA CGATGCAAGT GTCTCCTTAA CACCTGATGG ACAGGAATTA
CTTATATATA GATATGTAAA TGAAGGTGCT TTCCTTTCTT CAAAACTTGA TGGAACTACC
TGGACAATTG CAGAAGAATT AAAAGGAGAA GTGAATTCCA AATTCTATGA ACCTTCTGCC
TGTTTAACAA AAGATGGCAG TTATATTATT TTCAGCAGCA ACCAGCCTGG CGGGTATGGC
GGACTTGATT TATATATTTC TAAAAAACTT TTAAATGGTG AATGGGCACG TCCAATTAAT
TTAGGATCAA CCATCAATTC TAAATACGAC GAAGACTCTC CTTTTTTACA TCCGGATGGT
AAAACACTTT ACTTCAGTTC CAACGGACAT AATTCTATGG GCGGTTTTGA TATGTTTTAC
AGTACTGCAT TAACGGATTC TACCAATCAA TGGAATACAC CTATTAATGT AGGCTATCCA
TTAAACTCTA CACACGATGA TCTGCACTTT TCATTATCAG CAGACGGAAA AAGAATTTAC
TTCGCGTCTA TCCGTCCGGA AGGCTATGGG GATAAAGATA TATATGTAGC AACATTAGAA
GAAACAAACG TACAGGATGT ATTGGTAATT GTTGGTGTTA TTCAGGATTC ACTTTCCAAG
CAACCCGTAA GTGCGCGTAT AGAAGTAATT AATACAGAAA ACAATTCTGT TGTTGGTATT
TATAATTCTA ATAAAACAAC GGGGAAATAT ATTATGGCAC TTCCTGAAGG TGGCAAGTAT
AAAATTTCGA TCCAATCTGA AAATTATAAA ATTTGTGATG ATTTTATTAC AACGAAGGAA
TTGAATGGTT ACCAGGAACT TGAATCTAAC ATCAATCTAT GTCCGGATAT TAAAGAATAA
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| Protein sequence | MCITPLKVSA QVSSSRSETE SVAHTAFTNQ DYYHALPLYL HLDSLYPNVP KYMFPIGVSY
INTTGDQKKA LVYLEKCKLK PNQYPPTLHY YLGRAYHLDY RFDDAIVEFD VCLSHLYKAK
SKNALIIKDI YREIEMCENG KKIVQTPIVI DIENLGPEIN SSYAEYGPVL TLDEKEIIFT
SCRPETTGGM IDPEDGLFFE DVYISSKKGS VWQKALNMGP AINTNGHDAS VSLTPDGQEL
LIYRYVNEGA FLSSKLDGTT WTIAEELKGE VNSKFYEPSA CLTKDGSYII FSSNQPGGYG
GLDLYISKKL LNGEWARPIN LGSTINSKYD EDSPFLHPDG KTLYFSSNGH NSMGGFDMFY
STALTDSTNQ WNTPINVGYP LNSTHDDLHF SLSADGKRIY FASIRPEGYG DKDIYVATLE
ETNVQDVLVI VGVIQDSLSK QPVSARIEVI NTENNSVVGI YNSNKTTGKY IMALPEGGKY
KISIQSENYK ICDDFITTKE LNGYQELESN INLCPDIKE
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