Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1553 |
Symbol | |
ID | 4185723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1809016 |
End bp | 1809756 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071547 |
Product | hypothetical protein |
Protein accession | YP_678164 |
Protein GI | 110637957 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.960961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTAA TCAAAGGAGA ACCTGGTAAG GGCATCGTAT TAAAAGAATA CGGTAAAAAC ATACAAAAAA TAGTAGACTG GATTTTAACG ATTGAAGACA GAGAGCAACG TACCAGATAC GCCAACACAT GTGTGGAATT AATGCGCCAG TTAAATCCGG GTGTTCGTGA TACAGAAGAG CATACAACTA AATTATGGGA TCACCTTTTT ATCATGTCTA ATTTCAAATT AGATGTTGAT ACTCCGTACC CAATGCCTGA CATTGCAGTA CTTGGAAGAA AACCCGAAAG AGTTCCGTAC AACCACAACA AATTAAAATA CAAGCACTAC GGTAAAAACA TCAATCTTCT TATTGAACAG GCTATCTTAA AAGAAGATGG TGCAGAGAAA GAGGATGCGA TCATTTACCT GGGCCGTTTA ATGAAGCGTT TGTATAGTAC GTGGAATAAA GAAAATGTAG ACGATGAAGT TATCGTTGAA CATTTATCTG AACTTTCTAA AAACAACTTA CAAATAGATA TTGCCCGCGT TAAACAGGAA AAATTATTTG ACACTATTGG CGGCGCAACT GCAGACAGCA GAATCCCGAG CAGTCCTTCT TCTTCCGGCG GCTATTCAAG AGCAGGCGGA AGCAGCAACA GAAGATCGAA TTCAAATGGA GGCGGCGGTT ATTCAAATAA CAATGGCAAC AGCACGAGCA GATATCAACA GAATCAAAAT AAACCAAGAA GAAGAAATTA A
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Protein sequence | MTLIKGEPGK GIVLKEYGKN IQKIVDWILT IEDREQRTRY ANTCVELMRQ LNPGVRDTEE HTTKLWDHLF IMSNFKLDVD TPYPMPDIAV LGRKPERVPY NHNKLKYKHY GKNINLLIEQ AILKEDGAEK EDAIIYLGRL MKRLYSTWNK ENVDDEVIVE HLSELSKNNL QIDIARVKQE KLFDTIGGAT ADSRIPSSPS SSGGYSRAGG SSNRRSNSNG GGGYSNNNGN STSRYQQNQN KPRRRN
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