Gene CHU_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1553 
Symbol 
ID4185723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1809016 
End bp1809756 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content39% 
IMG OID638071547 
Producthypothetical protein 
Protein accessionYP_678164 
Protein GI110637957 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.960961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTAA TCAAAGGAGA ACCTGGTAAG GGCATCGTAT TAAAAGAATA CGGTAAAAAC 
ATACAAAAAA TAGTAGACTG GATTTTAACG ATTGAAGACA GAGAGCAACG TACCAGATAC
GCCAACACAT GTGTGGAATT AATGCGCCAG TTAAATCCGG GTGTTCGTGA TACAGAAGAG
CATACAACTA AATTATGGGA TCACCTTTTT ATCATGTCTA ATTTCAAATT AGATGTTGAT
ACTCCGTACC CAATGCCTGA CATTGCAGTA CTTGGAAGAA AACCCGAAAG AGTTCCGTAC
AACCACAACA AATTAAAATA CAAGCACTAC GGTAAAAACA TCAATCTTCT TATTGAACAG
GCTATCTTAA AAGAAGATGG TGCAGAGAAA GAGGATGCGA TCATTTACCT GGGCCGTTTA
ATGAAGCGTT TGTATAGTAC GTGGAATAAA GAAAATGTAG ACGATGAAGT TATCGTTGAA
CATTTATCTG AACTTTCTAA AAACAACTTA CAAATAGATA TTGCCCGCGT TAAACAGGAA
AAATTATTTG ACACTATTGG CGGCGCAACT GCAGACAGCA GAATCCCGAG CAGTCCTTCT
TCTTCCGGCG GCTATTCAAG AGCAGGCGGA AGCAGCAACA GAAGATCGAA TTCAAATGGA
GGCGGCGGTT ATTCAAATAA CAATGGCAAC AGCACGAGCA GATATCAACA GAATCAAAAT
AAACCAAGAA GAAGAAATTA A
 
Protein sequence
MTLIKGEPGK GIVLKEYGKN IQKIVDWILT IEDREQRTRY ANTCVELMRQ LNPGVRDTEE 
HTTKLWDHLF IMSNFKLDVD TPYPMPDIAV LGRKPERVPY NHNKLKYKHY GKNINLLIEQ
AILKEDGAEK EDAIIYLGRL MKRLYSTWNK ENVDDEVIVE HLSELSKNNL QIDIARVKQE
KLFDTIGGAT ADSRIPSSPS SSGGYSRAGG SSNRRSNSNG GGGYSNNNGN STSRYQQNQN
KPRRRN