Gene CHU_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1541 
Symbol 
ID4184519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1797822 
End bp1798643 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content42% 
IMG OID638071535 
Producthypothetical protein 
Protein accessionYP_678152 
Protein GI110637945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0160164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATC CGGAAGAGAG ACAATATGAG CGTAAGGGAA TTATTATTGC AATAATTGTC 
CATGCATTGT TGCTTCTGGG ATTTTTCTTT TGGATTGTTT TACAGCAGAC AGAACCCGGC
GGCGGCGGAA TTCCCGGCAC GGCAATCAAT TTTGGTTTTG GTGAAATAGG TTCCGGAGAC
AATAATTCCA TGGAAGAAGT TGGTACCGAA ACACCTCAGG ATAATCCGGA GCAGGTTGAA
CAGGCAGATG CTTCTCAATC CATTTCTTCA CCGGACGCTT CCAATTTAAC TACAAACAAT
CCGGATGCAG AAACGGTTGT GAATGAAACA CCAAAGAATC CGTCAAGCAG CACGTCAAAA
ACAACAACGA CAAGCACAAC AAATCAAACA GGTACTTCCA ATACACAACA AAACGCTTCT
TCTAAAACCG GTACAACAAA TTCCGGTGAT GGTGTTACCG GACAGCCTGG TAATCAGGGA
AATCCAAAAG GGACACTGGA TAGCAGAAAT TATTATGGTG AACCCGGCAA TGGAGGCAGC
GGCAAAGGTA CTGCCTTATC TATGGATGGC TGGCACCTGG AAAAAGAACC GAAAGTAGAG
AACGTTGAGA AGGAAGCAGG CAAAGTAACA TTTGTTATTA AGATTGATAA TGAAGGGGAG
ATCATAAGTC TTGTTGTAAA AGAAAAACAA GTAAGTGAAG CCTTGGTTAA GAAATGCGAA
TACGAGATCC GTAATAAAAT GGAATTTGTT AAAAACAAAA ATAACGGAAG TACTGCCGAA
GTTTCTACCG GCGTGATTAC GTTTTTATTC CGTTTGAATT AA
 
Protein sequence
MTHPEERQYE RKGIIIAIIV HALLLLGFFF WIVLQQTEPG GGGIPGTAIN FGFGEIGSGD 
NNSMEEVGTE TPQDNPEQVE QADASQSISS PDASNLTTNN PDAETVVNET PKNPSSSTSK
TTTTSTTNQT GTSNTQQNAS SKTGTTNSGD GVTGQPGNQG NPKGTLDSRN YYGEPGNGGS
GKGTALSMDG WHLEKEPKVE NVEKEAGKVT FVIKIDNEGE IISLVVKEKQ VSEALVKKCE
YEIRNKMEFV KNKNNGSTAE VSTGVITFLF RLN