Gene CHU_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1540 
Symbol 
ID4184518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1796685 
End bp1797770 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content38% 
IMG OID638071534 
Producthypothetical protein 
Protein accessionYP_678151 
Protein GI110637944 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0249446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA TAGAAAAATA CATATCAGAA CTAGTTGGCA ATCATGATTG TGTGATTGTG 
CCAGGCTTAG GCGCGTTTAT CGCTCAGGCA ACTTCTGCTG ATATTCATCC TATTACCCAT
AAATTTACAG CTCCGGGACG CACATTAGGT TTTAATGCGC AGATCAAGGT AAACGATGGT
TTACTGGCTG CTGAAATTTC CCGCAACGAA AATGTTTCTT TTCAGGAAGC AACCAATACA
ATCGAGGAAT TTGTAAAGAC ATTTAATTCA ACACTTGCTT TATACAAACA TTATAACCTT
TCTGAGATCG GACGTTTTTT TTATAATGTT GAAGGTAAAC TTGAGTTTGA ACCTGATTAT
AGAGTTAATT TTTCTTCCGA TAGCTTTGGC TTAACAGATT TTACTTTTAA ACCGATAGAA
CGTAATACCT TTGACATGAA TCAGCCTACA AAACACCGTA CTGCAAAAGA TCAGACTTCA
AAAGAAGAAC CATCAACAGT CGGTGAAAAG AAAAAAACAA CAACGTTTGC AAAAGTGTTA
TTTGTACTGA TGCCGTTACT GGTATTAGTT GGTGCTGCAG GTTTTGTCAG ATATAGCCAG
AATCAGGATA TCAGTATGGG CGGCGTTAAC ATTTTTGAAT CACTGGGATT GAAGAAAGAA
GCGGTAACTG TTACAGATAC AGCAGCAACA GCTGAAGTAC TGGTAAAAGA CACCCTTACC
TATACAACAG AAGAAACGCC TGTTGAAGCG CTTGCTCAGA CAGAAGAAGT TCCTGTAATG
GAAGAAGTGG TGATTGAAAC AAAAACGACT GCTAATACAT CTGCAAAAAA AGTACAGAAC
ATTGCTCCGG GTGAAGTTGT TTCAGGGACA TTCTATGTAA TCATCGGTTC ATTTAAAAAT
GAATCAAATG CCGATAAACT ATACAGTAAA CTAACAGATT CAGGTAAGCA GGTTGTGAAA
CTTCCGGTAG ATGCCAATGG TTTTTACAAA GTTGCCGTTG GTTCATTTGA ATCACTTGAA
AAAGCCAATA GTGAAATGGC AAACTTAGAG CCATCGTATA GCGGTATCTG GGTTAAAAAA
TATTAA
 
Protein sequence
MTNIEKYISE LVGNHDCVIV PGLGAFIAQA TSADIHPITH KFTAPGRTLG FNAQIKVNDG 
LLAAEISRNE NVSFQEATNT IEEFVKTFNS TLALYKHYNL SEIGRFFYNV EGKLEFEPDY
RVNFSSDSFG LTDFTFKPIE RNTFDMNQPT KHRTAKDQTS KEEPSTVGEK KKTTTFAKVL
FVLMPLLVLV GAAGFVRYSQ NQDISMGGVN IFESLGLKKE AVTVTDTAAT AEVLVKDTLT
YTTEETPVEA LAQTEEVPVM EEVVIETKTT ANTSAKKVQN IAPGEVVSGT FYVIIGSFKN
ESNADKLYSK LTDSGKQVVK LPVDANGFYK VAVGSFESLE KANSEMANLE PSYSGIWVKK
Y