Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1490 |
Symbol | |
ID | 4185387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1718003 |
End bp | 1718578 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638071483 |
Product | hypothetical protein |
Protein accession | YP_678101 |
Protein GI | 110637894 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0609163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000949468 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGTGTTAG CTCCTCACCT ATCAAAATTA ACCAGCAGTA TCAAAAAGGG CTTTACCGAT TATATGGATC TTGTAGGATA CGACTGTTAT TCTAAGGAAC GTATCATTAC TTTCAACTCC AGGACTAAGG CTACATTAAT TCAAAATCTC ATCTTGGAAC GGATTAAAGA AAACTTTGCG AATGTTCCTG GAGTTGCCTG TAAAGAATAC AAAGGGGTCT TCGGGCTTTT AATCGGCAAC CAGATCTTCA TTCGTTTTAA CAAGTTCAAC AAAAGACTTG AACCAGCTAA AGCAAAAACT ACTCAAAGCA AGAAGTTTGA AAAGCAGCAA ACAGTTATCA AAGGATTTCC CAGAAAGCCT ATGTTCCTAT ATGCAGGCTA TACTTTTACA AGCTCTATGA CAGGCATAGG AAGCATTCAC CTTGCCTTGC GTGTTAAAGG ACATCAGGAA TGGATCAAAG AACTATTTAA TGGCCTCGCT ATTCAACAGC CAATAGCTAA TCTTACACCT GTAATAGAAA AACCAGCAAA ACGTGTGCGT GTAAAACAAA CCGTTCAAAT TCAGCAAGCC AGTTAA
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Protein sequence | MVLAPHLSKL TSSIKKGFTD YMDLVGYDCY SKERIITFNS RTKATLIQNL ILERIKENFA NVPGVACKEY KGVFGLLIGN QIFIRFNKFN KRLEPAKAKT TQSKKFEKQQ TVIKGFPRKP MFLYAGYTFT SSMTGIGSIH LALRVKGHQE WIKELFNGLA IQQPIANLTP VIEKPAKRVR VKQTVQIQQA S
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