Gene CHU_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1490 
Symbol 
ID4185387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1718003 
End bp1718578 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content39% 
IMG OID638071483 
Producthypothetical protein 
Protein accessionYP_678101 
Protein GI110637894 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0609163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000949468 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTGTTAG CTCCTCACCT ATCAAAATTA ACCAGCAGTA TCAAAAAGGG CTTTACCGAT 
TATATGGATC TTGTAGGATA CGACTGTTAT TCTAAGGAAC GTATCATTAC TTTCAACTCC
AGGACTAAGG CTACATTAAT TCAAAATCTC ATCTTGGAAC GGATTAAAGA AAACTTTGCG
AATGTTCCTG GAGTTGCCTG TAAAGAATAC AAAGGGGTCT TCGGGCTTTT AATCGGCAAC
CAGATCTTCA TTCGTTTTAA CAAGTTCAAC AAAAGACTTG AACCAGCTAA AGCAAAAACT
ACTCAAAGCA AGAAGTTTGA AAAGCAGCAA ACAGTTATCA AAGGATTTCC CAGAAAGCCT
ATGTTCCTAT ATGCAGGCTA TACTTTTACA AGCTCTATGA CAGGCATAGG AAGCATTCAC
CTTGCCTTGC GTGTTAAAGG ACATCAGGAA TGGATCAAAG AACTATTTAA TGGCCTCGCT
ATTCAACAGC CAATAGCTAA TCTTACACCT GTAATAGAAA AACCAGCAAA ACGTGTGCGT
GTAAAACAAA CCGTTCAAAT TCAGCAAGCC AGTTAA
 
Protein sequence
MVLAPHLSKL TSSIKKGFTD YMDLVGYDCY SKERIITFNS RTKATLIQNL ILERIKENFA 
NVPGVACKEY KGVFGLLIGN QIFIRFNKFN KRLEPAKAKT TQSKKFEKQQ TVIKGFPRKP
MFLYAGYTFT SSMTGIGSIH LALRVKGHQE WIKELFNGLA IQQPIANLTP VIEKPAKRVR
VKQTVQIQQA S