Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1389 |
Symbol | fecD |
ID | 4185285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1610098 |
End bp | 1611096 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638071382 |
Product | iron (III) ABC transporter, permease |
Protein accession | YP_678000 |
Protein GI | 110637793 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.953687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAG CCATCCTGTA CATAGCCGCA CTGTTGGTTG TTGTTTTTCT GCTCGCTGCA GGAACCACGC TAGATGTAAA AACGATTCAT GCATTGCCTA AAGCAATGTT TCAATTTGAC AGCAGTTCTA TGAACAATGT AATCTGGATC GAATTGCGTA TGCCAAGATT GTTATTAGCA CTTTTAACCG GATCGGCCCT GGGTTTATCC GGCTATCTGA TGCAGGTACT TGTACGCAAT CCATTGGCAG ACCCTTATGT ATTGGGCAGT TCAGCCGGAG CATCGTTGTT TGCAGCCGTA TTTTATATCT GGCTGGCGCC GGGTTTCGCG AGTTTATCCG TTTTGCTTGT GTTAACATTT GCCGGAGCAT TCGGTACAAA TATCGTCTCG TTATTTCTTT CAACCGTTAA CGGACGGATC GTGCCATACC GGATGATACT GGTAGGTATT GCCATATCCA GTTTAGCCAT TGCCTTACTT TCATTAATGC TTTATACATC CGGTGCAGAC CAGTCCTGGA AAAATATTAT CTTCTGGACA TTCGGTTCTT TTCAAACAGC AAGCTGGGAA AAAGTTGCTG TAATGGCAGG CATTGTATCT GCGCTCATAC TCCTGTCAAT GCTGTTTTTC AACGCATTCC AGATCATGGA ACTTGGTGAA GAAAATGCAA ACAGAATAGG TGTACCCGTT CAGCGCTACC GCATTGTATT GTTACTGCTT TCATCCATGC TTACGGGAGC GGCGGTAAGT ATGGTCGGCC CCATCGGTTT TATAGGTTTG ATCATGCCGC ATATGGTGCG TATTCTTTTT AACTACAGAC AGACACGTGC ATTCATCCTT GTACTGTGTT ATTTATCAGG AGTATTTTTA ATGATCTGTG AAATGCTTTC GAGTCAGTTG TTTCCGCCGC AAGGCATACC AGCCGGCATA TTGATGTCCT TGATTGGTGT ACCATTCTTC CTGTACTTAT TGTTAAAGAC CAGCGATAAA AACATCTGA
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Protein sequence | MKQAILYIAA LLVVVFLLAA GTTLDVKTIH ALPKAMFQFD SSSMNNVIWI ELRMPRLLLA LLTGSALGLS GYLMQVLVRN PLADPYVLGS SAGASLFAAV FYIWLAPGFA SLSVLLVLTF AGAFGTNIVS LFLSTVNGRI VPYRMILVGI AISSLAIALL SLMLYTSGAD QSWKNIIFWT FGSFQTASWE KVAVMAGIVS ALILLSMLFF NAFQIMELGE ENANRIGVPV QRYRIVLLLL SSMLTGAAVS MVGPIGFIGL IMPHMVRILF NYRQTRAFIL VLCYLSGVFL MICEMLSSQL FPPQGIPAGI LMSLIGVPFF LYLLLKTSDK NI
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