Gene CHU_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1378 
SymbolnuoE 
ID4185451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1601941 
End bp1602474 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content42% 
IMG OID638071372 
ProductNADH dehydrogenase I chain E 
Protein accessionYP_677990 
Protein GI110637783 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.41658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAA CACAACAGCA ATTCCAGTTT TCTGAAGCAA GCCTGAAAAA AATTCAGGAG 
ATGAAAGCAC GTTATCCGGA AGGCAGACAA AAATCAGCGT TATTGCCCGT GTTGCATATG
GCACAGGATG AGTTAGGCGG CTGGCTTCCT GCCCCGCTTA TGGATTATGT TGCTTCCCTT
TTAGATATCA CTCCGATTGA AGTATATGAA GTAGCTTCGT TCTACTCCAT GTACAACTTA
AAGCCGGTTG GCAAGTGCAT GTTTGAATTT TGTCAGACAG GGCCGTGCTG CCTAAACGGT
GTTGAGGAAC TGATCGAATA TACGGAAGAC AAACTTGGAA TTAAACTGAA TCAGACAAGT
GCTGATGGCA GATTCACCAT TAAAGCGGTA GAATGCATGG GTTCATGCGG TACAGCTCCA
ATGGCTCAGA TCGGAACCTA TTATTACGAA AATCTGACGA AAGAAAAGAT TGATAAAATC
ATCGAAGTAT TCGGTCAGCC GGATTTTGAT CCATTTAAAA AATACGCAAT CTAA
 
Protein sequence
MEQTQQQFQF SEASLKKIQE MKARYPEGRQ KSALLPVLHM AQDELGGWLP APLMDYVASL 
LDITPIEVYE VASFYSMYNL KPVGKCMFEF CQTGPCCLNG VEELIEYTED KLGIKLNQTS
ADGRFTIKAV ECMGSCGTAP MAQIGTYYYE NLTKEKIDKI IEVFGQPDFD PFKKYAI