Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1361 |
Symbol | |
ID | 4183489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1584247 |
End bp | 1584879 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638071355 |
Product | hypothetical protein |
Protein accession | YP_677973 |
Protein GI | 110637766 |
COG category | [S] Function unknown |
COG ID | [COG1259] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.183231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGAAAA TTAGATTAGA AATTATAGGT TTGTCGTCCA GTCAATCGCA AACAGGCTCG TTTGCTTTGG TATTAGGAGA AGTGAATGGT AACAGACGGT TACCGATTAT TATTGGAATG TTTGAAGCGC AAGCAATTGC TATTGAAATC GAAAAGGTAA TACCTAATCG GCCAATGACA CACGATTTAT TTAAATCGTT TGCCTTGTCA TTCCATTTTA TCGTCGAAGA GATTGTAATT TCAGATCTGA AAGAAGGTGT TTTCTTTGCT AAAATTATCT GCTCAGACGG AATTAAAAAT ATCGAGATCG ATGCACGTCC TTCTGATGCG ATTGCTATAG GTTTGCGTTT TGATGTTCCG ATTTATTCAT ATGAAACCAT TATGTCTGAA GCAGGTATTG TGCTGAACGA CGATATGGAT GATATGGATG AAGATGAGGA TGAAGACGAC GAAGATAAGC TTGAAGAAGC AACAATAAGT TCTGCTAAAG CGGATTCGAG TTTTTCAGGA AGAGAAGACC AGATAAAGAA TATGTCTCTT GATCAGCTTC AGGCAATGCT TGATGAAGCA ATTGAAAAAG AAGATTATGA AAAAGCTGCC CGCGTGCGCG ATGAAATGAA TAAACGTAAT TGA
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Protein sequence | MEKIRLEIIG LSSSQSQTGS FALVLGEVNG NRRLPIIIGM FEAQAIAIEI EKVIPNRPMT HDLFKSFALS FHFIVEEIVI SDLKEGVFFA KIICSDGIKN IEIDARPSDA IAIGLRFDVP IYSYETIMSE AGIVLNDDMD DMDEDEDEDD EDKLEEATIS SAKADSSFSG REDQIKNMSL DQLQAMLDEA IEKEDYEKAA RVRDEMNKRN
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