| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1349 |
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| Symbol | dnaB |
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| ID | 4183477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1573270 |
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| End bp | 1574811 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638071343 |
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| Product | primary replicative DNA helicase |
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| Protein accession | YP_677961 |
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| Protein GI | 110637754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00606931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.114778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTTG GAAAATCGAG GACAAAAGCT ACAGGGTTTG TAGCAAAAAA TACTATAGCA
TCGGATCTGT TAGCCGGAAT GGGAAAGCTC CCGCCGCAGG CCATTGAAGT GGAAGAGGCT
GTATTGGGGG CATTATTGCT GGAGAAAGAT GCGTTGACTT CAGTAATTGA TATTTTAAAA
CCTGAAAGTT TTTACAAAGA AGCACATCAG AAAATATATT TAGCTGTTCT GGAATTGTTT
GACCGTTCGG AACCGGTCGA TCTGATTACT GTTGTAAATC AGCTGCGTTC AAAAGCGGAG
CTGGAATTTG TCGGCGGTGC GTATTACATT ACGGAATTGA CAACAAAGGT CAGTTCGGCA
GCCAACATTG AATTTCACGC GCGTATCGTT TCAGAACAAT CGATCAAACG TAATCTGATT
ACGATTGCTT CTAAAATTCA CAAAGACGCC TATGAAGATA CTACAGACGT TTTTGATTTA
TTAGATAAAA CAGAAAAGGA CCTGTACGAA GTTTCTGAAG CCAACATCCG TAAGAATTAT
TCTGAAATGA GAAGTTTGAT CGGACAGGCA TTGAAAGAGC TGGCAGAAAA GAAAGACCAG
GCGGATGGAT TAACAGGCGT ACCAAGCGGT ATGTCTGATC TGGACCGTGT TACGTCTGGT
TTTCAAAAAA GTGATCTGAT CATCATTGCT GCCCGTCCGG GTATGGGAAA GACAGCCTTT
GTCTTGTCTG CCATGCGCAA TGCAGCAGTT GATTTTAAGA AACCTATTGC CTTATTCTCT
TTGGAGATGT CGGCTGTTCA GCTTGTGAAT CGTTTAATTG CTTCTGAAGC TGAACTGGAT
AGTTATAAAA TTAAAACAGG TAAGCTGGAA GAATACGAAT GGCAGCAATT GCACAGTAAA
ATTTCTCCAT TAACTTCTGC TCCTATATAC ATTGATGATA CACCGGGTTT ATCGATCCGG
GAACTGCGTA CCAAAGCGCG CCGCTTGAAA TCGCGTAATG ATATTCAGAT GATCATCATT
GATTACCTGC AGCTGATGTC TGCTGATACA AGTAACAAAG GCGGCGGCGG TAACCGTGAA
CAGGAAATCT CTGCGATCTC GCGTGCATTA AAAGGATTGG CCAAAGAACT GGAAGTGCCT
GTAATTGCGC TTTCTCAGTT GAGTCGTGCG GTTGAATCCA GAGGAGGAGA TAAACGTCCG
CAGCTTTCAG ATTTACGTGA ATCTGGTGCG ATTGAACAGG ATGCGGATAT TGTAATGTTC
CTGTACCGTC CGGAATACTA TAAAATCGAA CAGGATGAAG AAGGAAATCC GACAGCAGGT
ACAGGTGAAG TAATTATTGC CAAACACCGT AACGGTTCGC TGGAAACAGT TAAACTGAAA
TACATCGGTA AGTTTACGAA ATTCGCCGAT CTTGGCGGAG ATTTCATTGA TATGGATAGC
AATAACTGGA GCGGAGATCA GAATAAATTC TTCGGCGGAC AAACGCTGGG CAGTAAGGTC
AACGACTTCG GCGGCGACGA CGACGGGCCG GCACCGTTTT AG
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| Protein sequence | MEFGKSRTKA TGFVAKNTIA SDLLAGMGKL PPQAIEVEEA VLGALLLEKD ALTSVIDILK
PESFYKEAHQ KIYLAVLELF DRSEPVDLIT VVNQLRSKAE LEFVGGAYYI TELTTKVSSA
ANIEFHARIV SEQSIKRNLI TIASKIHKDA YEDTTDVFDL LDKTEKDLYE VSEANIRKNY
SEMRSLIGQA LKELAEKKDQ ADGLTGVPSG MSDLDRVTSG FQKSDLIIIA ARPGMGKTAF
VLSAMRNAAV DFKKPIALFS LEMSAVQLVN RLIASEAELD SYKIKTGKLE EYEWQQLHSK
ISPLTSAPIY IDDTPGLSIR ELRTKARRLK SRNDIQMIII DYLQLMSADT SNKGGGGNRE
QEISAISRAL KGLAKELEVP VIALSQLSRA VESRGGDKRP QLSDLRESGA IEQDADIVMF
LYRPEYYKIE QDEEGNPTAG TGEVIIAKHR NGSLETVKLK YIGKFTKFAD LGGDFIDMDS
NNWSGDQNKF FGGQTLGSKV NDFGGDDDGP APF
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