| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1332 |
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| Symbol | nirB |
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| ID | 4185837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1546940 |
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| End bp | 1549453 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638071326 |
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| Product | assimilatory nitrite reductase (NAD(P)H) large subunit precursor |
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| Protein accession | YP_677944 |
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| Protein GI | 110637737 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0149274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACG AAACGCACAT ACTGGTTGTA GGCAATGGAA TGGTTGGCTA CAAGTTCTGC
GAAAAGCTGA AGAAAAAAGA TTCTTCTGGA AACTTCACCA TTACCGTACT TGGAGAAGAA
CCAAGACCAG CCTATGACCG GGTTCACTTA AGTGAATACT TCAGCACACG TTCTGCAGAT
CATTTAACAA TGGCTCCGAA AGAATGGTAT GCGGCAAACA ACATTAACCT TGTGTTAGGT
AATCCGGTTG TATCTATAGA TCGGGAACAG AAATCTGTTA CTACCTTTTC AGGTGCTGTC
TATACGTATG ATAAATTAAT ACTTGCCACC GGGTCTGCTG CTTTTGTTCC ACCTATTAAA
GGTGTTGAGA AAGACGGCAT CTTTGTATAC CGCACGATTG AAGATCTGGA GATGATGATC
AAGCAGGCGG AAAAATCAAA GGTGGGTGCT GTAATCGGCG GCGGCTTATT AGGTCTGGAA
GCTGCGAAAG CCTTACTGGA CTTAGGATTG AAGCCCCATG TGATCGAGTT TGCGCCGCGG
TTAATGCCTC GTCAGCTGGA TGAGGCCGGT TCTAAAATAC TTCAGCAAAA ATTAGAATCA
CTCGGTTTAT CCATTCACTT AAATAAAACA ACTTCGTACT TCGATGGTGA TGCAGCAGTA
ACAGCTATGC AGTTTGCTGA TGATACGCGT CTGGAATTGG ATATGGTTGT AATTTCTGCC
GGGATTAAAC CAAGAGACGA AATTGCTAAG AAAGCAGGTT TAACGGTAGG TCCCAGAGGT
GGTATTGAAG TAAATGATGC ACTTCAGACA TCTGACCCGA ACATTTATGC CATTGGTGAA
TGTGCTTTGC ATTGGGGTAT GATCTATGGA TTGGTTGCAC CGGGTTATGA AATGGCTGAA
GTAGTGGCGG AGAATCTGAT CCATGAACAC AGCAAAGCAT TCAGATCGTT TGATATGTCT
ACCAAATTGA AATTAATTGG TGTAGATGTT GCAAGCTTTG GTGATGCATT TGGTACCGAA
GAAGGTTCTG TTACAATTAC ATATGAAAAT AAAGACAAAG GAATTTACAA GCGTTTAAAT
TTATCTGCCG ATAAAAAACG TGTTATAGGT GGGATATTAG TGGGTGATGC TGAAAGCTAT
AACATGTTGC TGCAGATGGT TACTAACAAG ATGGCTTTAC CACCGGACCC GGAAGATCTG
ATTCTGGGCT CCCGTGGTGA AGGCAGGTCT GAAGGAGGTA ATGCAGGCGT GATGAGCCTC
CCCGATGAAG CATTGATCTG TTCATGCGAA GGTGTTACGA AAGGCATGAT CTGCTGCGCG
GTAACGGATC AACACGTAAC AGATCTTCCG GGCATGAAAA AATGTACCAA AGCCGGAACA
GGCTGCGGTG GCTGTGTGCC GATGGTGAAT GATTTAATTT CCGAGACATT AAAATCTCAA
GGCAAGGTGA TTAAAAAAGT GCTCTGCGAA CACTTTGATT ATTCCCGTCA GGAATTATTG
GATCTGATAA AGATCAATGA ATATAAAAGT TACGATGTTA TTCTCAATGA AGCTGGAAAA
GGCGATGGCT GCGAGATCTG TAAACCGGCA ATCGGTTCAA TCTTAGCAAG TGTCTGGAAT
GAAGTTATTT TAAAACAGGC CACGATACAG GACTCAAACG ACCGCTTTTT AGCCAACCTG
CAGAAAGGCG GTACTTACTC GGTTGTACCA CGTGTGGCAG GCGGAGAAAT AACGGCAGAT
AAACTCATTG TACTGGGTGA AGTAGCGAAG AAATACGATC TCTATTGTAA AATTACCGGC
GGACAGCGGA TCGACTTGTT CGGTGCGCCG GTTCATCAAT TGCCGGATAT CTGGGAAGAA
CTGATCCATG CGGGTTTTGA AAGCGGACAT GCATACGGTA AATCATTGCG TACGGTAAAA
AGTTGTGTCG GGTCAACGTG GTGCAGGTTT GGCGTACAGG ATGCTGTTTC TTATGCGATC
CGCATTGAAG ACCGGTACAA AGGTATCCGA TCTCCGCATA AAGTAAAGAT GGCTGTATCG
GGTTGTGTAC GTGAATGCGC AGAAGCTCAA AGCAAAGACT TTGGCATCAT TGCTACCGAT
AAGGGATGGA ACTTATATGT ATGCGGCAAC GGTGGTGCAA AACCTCAGCA CGCACTATTA
TTTGCTTCAG ACCTGGATGA TGAAACATGC ATCCGATACA TAGACCGTAT CATGATATTC
TATATCCGCA CGGCAGAACC ATTAATGCGC ACAGCAACAT GGTTAAATAA ATTAGAAGGC
GGCATGGATT ATTTGCGCGA TGTAATTATC AACGATAGTC TTGGTATGTG CAGCCAGTTT
GAGAAAGAAC TGCAACTGCT TGTTGATACT TATCATTGTG AATGGAAAGA AGTTGTTGAA
AATCCGGAAT TAAGAAAACG TTTTAACACA TTCATTAATT CAGAAGAAGC AGATGAAACA
ATGGCATTTG TAGAAATGCG TACACAAAAA AAACCAGCAA ACTGGAAAGC GTAA
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| Protein sequence | MKNETHILVV GNGMVGYKFC EKLKKKDSSG NFTITVLGEE PRPAYDRVHL SEYFSTRSAD
HLTMAPKEWY AANNINLVLG NPVVSIDREQ KSVTTFSGAV YTYDKLILAT GSAAFVPPIK
GVEKDGIFVY RTIEDLEMMI KQAEKSKVGA VIGGGLLGLE AAKALLDLGL KPHVIEFAPR
LMPRQLDEAG SKILQQKLES LGLSIHLNKT TSYFDGDAAV TAMQFADDTR LELDMVVISA
GIKPRDEIAK KAGLTVGPRG GIEVNDALQT SDPNIYAIGE CALHWGMIYG LVAPGYEMAE
VVAENLIHEH SKAFRSFDMS TKLKLIGVDV ASFGDAFGTE EGSVTITYEN KDKGIYKRLN
LSADKKRVIG GILVGDAESY NMLLQMVTNK MALPPDPEDL ILGSRGEGRS EGGNAGVMSL
PDEALICSCE GVTKGMICCA VTDQHVTDLP GMKKCTKAGT GCGGCVPMVN DLISETLKSQ
GKVIKKVLCE HFDYSRQELL DLIKINEYKS YDVILNEAGK GDGCEICKPA IGSILASVWN
EVILKQATIQ DSNDRFLANL QKGGTYSVVP RVAGGEITAD KLIVLGEVAK KYDLYCKITG
GQRIDLFGAP VHQLPDIWEE LIHAGFESGH AYGKSLRTVK SCVGSTWCRF GVQDAVSYAI
RIEDRYKGIR SPHKVKMAVS GCVRECAEAQ SKDFGIIATD KGWNLYVCGN GGAKPQHALL
FASDLDDETC IRYIDRIMIF YIRTAEPLMR TATWLNKLEG GMDYLRDVII NDSLGMCSQF
EKELQLLVDT YHCEWKEVVE NPELRKRFNT FINSEEADET MAFVEMRTQK KPANWKA
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