| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1316 |
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| Symbol | uhpB |
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| ID | 4186126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1528673 |
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| End bp | 1530250 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638071310 |
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| Product | sensor histidine protein kinase |
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| Protein accession | YP_677928 |
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| Protein GI | 110637721 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.176896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0650582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTTTGC TGATCCGTGA TGATCTGCCA CACAAACAAT ATTCCGATAT GGGTAAAGAA
CTTACAACTC TTCTAACGGG CTGGAAAGAG CGGCAGTTAG GTTTGTTGCA TGGAGATACC
GCATTAAAGC TGCCCTCTAC GGAAAGTCTA GCCATACAGA AAATGTTCAA ACAAACAGAA
CCGTATTTCA GTCAGGTTTA TGAGAATGCA AGTATCATAG CCAATGAATC GCAAAACGTG
CGTAAAGATT CTCTGGTTGT AGAAACGGCA TTGAAAAAAG TAATCGATTC AGAAAAAAAA
TTTTTGAATC ACATGAATGA AATTGTCTAT CAATATGATG CTGAGGCGCG GGCAAAAGTA
TTGTTCTTAA AAAACATTGA ATTCATACTT TTTGTTGTAA CCATATTGAT TCTGATTGCG
GAAGGTCTGT TTATTTTCAA ACCTGTATCC AGAAAAATTA AAGAGACAAT CTCTGAGCTG
ATTGATGCGG AATCTAAATC AACTGCATTA ACACATAAGA TCAAGATTGC AAACAATTCG
CTGAGTAAGT CTTTAAAAGA TATAAAAGGA ATTAATTATG CGCTTGAGTT GGCAACCATT
ATGATCCGGA CAGATCGCTA TGGTGTCATT ACCTATGCAA ACGAGAAATT TTGTGAGATA
TTGAAATATG ATAAAGAGGA ATTGATCGGT CAGCGTTTTG ATATCTTAAA CAGTCATTAT
CACGCGCAGC GTTTTTTTGA TATCATGTGG GAAACCATAT CTACAGGCAA TGTATGGAAC
GATGAGATAC GCAACAAAGC AAAAGACGGA AGTTATGTCT GGCTGGACAC TACCATCATT
CCGGTACTGA ATGATGAGCA TGTACCCAAT CAATATATAG CGATCTATAC CGATCTATCG
GAAAAATTCA GACAAAGTGT AACAGAACAT AAAATCCGTA CAACGTCTGT TTTAGAAGGG
CAGGAGCATG AGCGCAGAAA GATTGCGCGG GAACTGCATG ATGGTTTAGG ACAAATGCTG
ACTGCCTTGA AGTTTAATAT ACAAGGCATG AAAACACCTT CCACAAAAAA AGAACAGGCG
CACGTTGAGG GTATTAAACA GCTCATTCAG GAAACCATAC TTGAAGTTAG GAGAATATCG
TTTGATCTGA TGCCAAGTGT ATTAAATGAT TTTGGATTAG CTGCAGCATT GCAGCATTTA
AGTGAACGTT TCACCATTTC CGGAACAAAG CAGATAAGCA TTGAATATGT AGGGGTAAAG
GATATCGGAC GGTTCGGTAA GAATGTTGAA ATCAATACAT ACCGCATTGT ACAGGAAGCA
TTAAACAATG CGATCAAATA TGCGGAAGCA ACTAAAATAA CCCTGGATCT GCAATTCGAT
TCGAACCGGA TTCAGTTTTC AATACAGGAT AATGGTAAAG GTTTTACACC GCATGATAAA
AAGAAAGCAG ATGGCAGCGG ACGGGGAATG ACCAATATCA GAGAAAGAGT TAGTTTATTA
AATGGAAATC TTATATTTAA TAGTATAATT GAGGAAGGGA CTACCATAAC CGTAGAAATT
CCTGCCGTAA TCGTTTAG
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| Protein sequence | MCLLIRDDLP HKQYSDMGKE LTTLLTGWKE RQLGLLHGDT ALKLPSTESL AIQKMFKQTE
PYFSQVYENA SIIANESQNV RKDSLVVETA LKKVIDSEKK FLNHMNEIVY QYDAEARAKV
LFLKNIEFIL FVVTILILIA EGLFIFKPVS RKIKETISEL IDAESKSTAL THKIKIANNS
LSKSLKDIKG INYALELATI MIRTDRYGVI TYANEKFCEI LKYDKEELIG QRFDILNSHY
HAQRFFDIMW ETISTGNVWN DEIRNKAKDG SYVWLDTTII PVLNDEHVPN QYIAIYTDLS
EKFRQSVTEH KIRTTSVLEG QEHERRKIAR ELHDGLGQML TALKFNIQGM KTPSTKKEQA
HVEGIKQLIQ ETILEVRRIS FDLMPSVLND FGLAAALQHL SERFTISGTK QISIEYVGVK
DIGRFGKNVE INTYRIVQEA LNNAIKYAEA TKITLDLQFD SNRIQFSIQD NGKGFTPHDK
KKADGSGRGM TNIRERVSLL NGNLIFNSII EEGTTITVEI PAVIV
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