| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1272 |
|---|
| Symbol | hisA |
|---|
| ID | 4185971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1482901 |
|---|
| End bp | 1483623 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638071266 |
|---|
| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
|---|
| Protein accession | YP_677884 |
|---|
| Protein GI | 110637677 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
|---|
| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0933413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.320692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACAGA TAATTCCCGC AATAGATATA ATAGATGGCA AGTGTGTGCG GTTAACACAG
GGCGATTACA ATCAGAAAAA AGAATATCAT TCCAATCCGG TTGAAGTAGC TAAGATGTTT
GAAGATGCAG GTATTCAACG CTTGCATTTA GTGGATCTGG ATGGTGCAAA GAAAAAACAG
ATCGTTAATT ATAAAGTACT TGAAAATATA ACCGCTGCAA CAAAATTGTC AGTAGACTTC
GGAGGCGGTC TGCAGTCAGA CGAAGATCTT AAAATCGCAT TTGATGCAGG TGCCAGACAA
ATTACAGCAG GTAGTATTGC TGTTAAAAAT CCGGAAAAAG TTCAGCATTG GCTGACACAG
TTTGGTAAAG AATGCATCAT TCTCGGAGCA GATACTAAAT CAGGAATGAT TGCTGTACAT
GGCTGGCAGG AAACATCTGA CCTGAGTATT CAGCAGTTAA TGAATCAGTT CATACCCTTT
GGTATTTCAT ATTCCATTTG TACCGATGTC GCAAAAGATG GTTTGCTGCA AGGCCCTTCG
TTCGATTTAT ATAAACAATT AAACGAAGAA TTTAAGCAGA TTAACTGGAT TGCCAGCGGC
GGTGTCGCAG AGCTTGCTGA TATTGAAAAG TTAAACGATA TGGGTATCTA TGGAGTAATT
GTTGGCAAAG CTTTCTATGA AGGAAGGATA ACATTGCAGC AATTAGCGCA ATTCAATGCG
TAA
|
|---|
| Protein sequence | MIQIIPAIDI IDGKCVRLTQ GDYNQKKEYH SNPVEVAKMF EDAGIQRLHL VDLDGAKKKQ
IVNYKVLENI TAATKLSVDF GGGLQSDEDL KIAFDAGARQ ITAGSIAVKN PEKVQHWLTQ
FGKECIILGA DTKSGMIAVH GWQETSDLSI QQLMNQFIPF GISYSICTDV AKDGLLQGPS
FDLYKQLNEE FKQINWIASG GVAELADIEK LNDMGIYGVI VGKAFYEGRI TLQQLAQFNA
|
|---|
| |