Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1255 |
Symbol | livG |
ID | 4186947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1464834 |
End bp | 1466171 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071249 |
Product | branched-chain amino acid ABC transporter, periplasmic protein |
Protein accession | YP_677867 |
Protein GI | 110637660 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.857524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATGA AAACAGCACG ATTAAACCTC ATACAACTGT TCAAGTATGT ATGCGTCTTA CTGGCAGTAG GATTTTTATT AACAAGCTGC TCAGGCAGTG AAACAAAAAC AGAAGGAGAA ACTACTACTG ACTCGACTAA ATCAGAAGAA ACAATTAAAG TAGGTATTCT GCATTCGTTA AGCGGTACCA TGGCTATTTC TGAAGTTTCA TTAAAGGATG TTATTGAAAT GGCGATCGAA GAGATCAATA ATTCCGGCGG TGTATTAGGC AAAAAAGTAG AAGCCGTGAT TGTTGATCCG GCTTCTGACT GGGATTTATT TGCAGAAAAA TCCAAGGAAT TGATTTTGGA TAAAAAAGTT ACTGCTGTAT TCGGTTGCTG GACTTCTGTA TCCAGAAAGT CTGTGCTTCC TGTGTTTGAA GAACATAATA ATTTATTGTT TTATCCGGTA CAGTATGAAG GCGAAGAATG TTCCGCAAAC GTTATCTATT CTGGTGCTAC ACCAAATCAG CAATTGATTC CGGCAGCAGA ATATTTAATG AGCGAAAAAG GCGGCGGATA TAAAAAATTC TATCTGTTAG GTACGGATTA TGTGTTTCCG AGAACAGCTA ACAAAATTCT GAAAGCATTC TTATTATCGA AAGGTGTTCC AAAAGAAAAT ATCATTGAAG AATATACACC GTTCCACCAC CAGGATTATC AGACAATTGT TTCTAAGATC AAGAAATTTG CTGCAGGCGG CAAAGCATGT GTATTGAGTA CAGTAAATGG TGACTCAAAC GTTCCGTTCT ACAAAGAATT CTCTAACCAG GGCTTAACTG CTGGTATCTG TCCGATCATG GCATTCTCTG TTGCTGAAGA TGAACTGCGT TCTATGGATA CAGAGTTTTT AGTGGGTCAC TTAGCTGCAT GGAATTATTA CCAATCATTG GAGTCTCCTG AAAACAAAAA ATTCGTTGCA GATTTCAAAG CATACTGTGC GAAAAAAGGA TTGCCGGGCG GCGACAAACG TGTAACAGAT GATCCGATCT GTTGGGCTTA TACAGATGTT TATCTTTGGA AAAATGCGGT AGAAAAAGCA GGTACGACGG ATATTGCAAA AATGCGTCCG GAATTATACG GACTTGAATT TTTATCACCA GGCGGCCCTG TAAAAATGAG CCCGATCAAC CATCACCTTG AAAAGCCAGT ATTGATCGGT GAGATCAGAA GCGATGGGCA GTTTGACATC ATCTGGAAAA GTAACGGATT GGTATCTCCT GAACCATGGT CTAAATTAAC TTCGCCGAAT AAGAGCTGTG ATCATGTAAG CCACGGCGGT ACATACAACC TTAAATAA
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Protein sequence | MTMKTARLNL IQLFKYVCVL LAVGFLLTSC SGSETKTEGE TTTDSTKSEE TIKVGILHSL SGTMAISEVS LKDVIEMAIE EINNSGGVLG KKVEAVIVDP ASDWDLFAEK SKELILDKKV TAVFGCWTSV SRKSVLPVFE EHNNLLFYPV QYEGEECSAN VIYSGATPNQ QLIPAAEYLM SEKGGGYKKF YLLGTDYVFP RTANKILKAF LLSKGVPKEN IIEEYTPFHH QDYQTIVSKI KKFAAGGKAC VLSTVNGDSN VPFYKEFSNQ GLTAGICPIM AFSVAEDELR SMDTEFLVGH LAAWNYYQSL ESPENKKFVA DFKAYCAKKG LPGGDKRVTD DPICWAYTDV YLWKNAVEKA GTTDIAKMRP ELYGLEFLSP GGPVKMSPIN HHLEKPVLIG EIRSDGQFDI IWKSNGLVSP EPWSKLTSPN KSCDHVSHGG TYNLK
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