Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1240 |
Symbol | |
ID | 4187030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1443143 |
End bp | 1448389 |
Gene Length | 5247 bp |
Protein Length | 1748 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638071234 |
Product | bifunctional xylanase/esterase; CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein |
Protein accession | YP_677852 |
Protein GI | 110637645 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3405] Endoglucanase Y |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.267391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.341436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT CTGTTTCTGT TTTTGTTGCC CTGTTTTGTT GTGCGTTTTT TTACGCAGTT TCATCGAAGG CTCAGATTCC AGCTGCATAC CAGGTAGGTA CATGGAAAAA TTTTAAACCT GCCGCGGTAA CGTACACATT TGATGATAAC ACCAGCAATC AGATTCCGGT TGCCATTCCA TTATTAAATA CCTACGGTTT TAAATCGACC ATATTTGCTG TAACGCAGAG CATGAGCCCG AACTGGGCAA ACATGAAAAC GGCAGCCAAT GCCGGACACG AGATCGGCAG TCATACTGTA ACACATAATA ACTTAAATGG CGCGGCTATA TCTGCACAGG ATACAGAGCT GAAGAATTCG CAGGCAACCA TTAACAGTAA TATCACTACG CAGAAATGTT ATACGGTAGC GTATCCGAAT TGTAATATCG GAGATGTATC AACCATTCAG AAATATTACA TTGCGGGAAG AACATGCAGC GGTCAGATCA TACCGAGTTC GCCGACTGAT TTTTATAATT TAAGTTCAAT CATATGCGGC AATACAGGTG TAAACACCGC CAATGATATG AATACACGTG TCAACAGCGC AAAAACTTCA GGCGGCTGGT GTGTGTTTTT AATACACGGC ATTGATGGCG ATGGCGGTTA TTCGCCGCTT GCATCGAGCG TACTGAGCAG TCACCTTTCT TATGTGAATA CCAATACAGC CGATTATTGG GTAGGCACAT TCGGTAACGT AGCTAAATAC ATTAAAGAAC GTAATGCCAT GTCTATTGCA GAAACTACTG TAACAGCAGA TTCCCTGAGA ATGACGCCGA CAGATAATCT GGACAATACC ATTTATGATG CGGCTATAAC TATCCGCCGT CAATTGCCTT CAGGCTGGAC TGCCGCGCGT GTTATGCAGG CAGGTACAAT TATTACTTCG ACAATTGTTA CGGTTAATAC TGTTAAGTAT GTACAGTTTG ATGTGGTTCC GGATAAAGGT GTGTATACAT TAGCGAATGC TGCTGTTACC AATCCGGGCT GTGCAACTGC TGCACCAACG GTTTCGCCGG TGTCATTTGT GCAGGGAGCT GCCGCAACGG CATTAACAGC TACCGGTACA GCATTAAAAT GGTACGGTAC AAATGCAACA GCCGGCACGG CCAGTACAAC AGCACCAACA CCATCTACGA CTGCAGCCGG TTCAACAACC TATTATGTTT CACAGACGCT AAACGGATGC GAAGGTCCGA GGGCAGCACT TGTAGTAACC GTAACGGCTT CCGGTACAGG TAATACAAGC TGTAACGAAA CAGGGCAGGG AGCATATTAT ACAGGCGTAT ACAGAAATAT GTTCAAAGAA TTGCTTAATA AGACAGATGC AGAAGTAAAA GCAAAGGTTG ATGCTGCTTT TCAGCATTTC TTCTACGGCA GTTCCACTCA AAAACTATAT TATGAAGTAG GTACTGATAT GGCTTATATA CAAGATATCG CTAACAATGA TGTGCGTTCA GAAGGGATGT CTTATGGCCT TATGATCTGT GTGCAGCTTG ATAAAAAGGC AGAGTTTGAT AAATTATGGA AATGGACGAA GACTTATATG CAGCATAATT CAGGTAACCT GGATGGATTT TTCCGCTGGC AGTTAAATAC AAACGGAGGC GTTATTGATA ATAATCCTGC ACCAGATGGT GAAGCTTATT TTATAACGGC ATTGTTTTTT GCTGCTAACA GATGGGGTAA TGGAACCGGT ATTTACAATT ACAGTGCAGA AGCTCAAGCT GTATTAAGTA AAGTGCAGAG TAAGACAGGT GCCGGAGGCA TAAACAGCTT ATTCAATACC AATTCCAAGC TGATTACTTT TGGACCGAAT GGCGGATCGT ATGATTTTAC AGATCCTTCC TACAATCTGC CAGGGTTTTT TGAACTTTGG GGAAGATGGT CCACTTCAAA TACTGCGTTC TGGCAACAGA CACCTGCAGC GGCAAGAAAG CTGATCCGCG ACGCTTCACA TTCTACTTCG GGCCTTACAG CAGATTATTC TAACTTTGAC GGTACGCCTA AAACAACATC ATTCAACAGC GACAGTCACC GGTTTATGTA CGATGCGTGG CGCACCATTA TGAACCTGGG TATGGATTAT CACTGGTTTA AGGTAGATGC CCAGCAGCCT GTTATCGCAG AGAGGTATCT GAACTTTTTT AAAAATCAAG GTTCGAATTA TAAAAATCAT TACGACTGGA ACGGATCAAA TGCCGGCGGA GATCATTCAA CGGGCCTTGT AGCCTGTAAT GCCGTAGCGT CTTTAGCTGT TACAAATACA ACACTTACTA CTCCGTTTGT ACAGGAATTC TGGAGTACAG GCCTTCCTAC CGGTACGTAT AGATATTACG ATGGTATGTT ATACCTGCTT GGTATGTTAA ACTGCTCCGG TAATTTCAAA GTATGGAAGC CTGAATGTCC GAATACCTGT GCGACACCTG CACCAACTGT TGCCGCAGCT GTTATTAATT ACGACCTGAA TGCTGCAGCT ACAGCATTAA CGGCAACGGG TACTGCTGTT AAATGGTATA CGGTGGCAAC AGGCGGTACT GCTTTAACAA CAGCACCAAC ACCTTCCACT TCGGTTACCG GAACAATGGT ATATTATGCC GCACAGACAT TAAATGGCTG TGAAGGCCCA CGTGTTTCTG TAACAGTTAA CGTAGTAAAC AATTATAAAA TATATAAAGT AAGTGCTCCG GTAGCGGTAG ACGGTACGGT AGACGAAGTA TGGAACAATG TAAATGTGCT GCCTGCTGCC GCAACTAAAT TGTTGTCAGG TACCGTTACA AACAGCGCAG ACTTATCGGG TAATTTTAAA GCACTATGGG ATGATACTTA CCTGTATATA CTTGCTGATA TTACGGATGA TGTAAAAATA AGCGAAAGTA CAAATGCTTA CGATGATGAC GGCGTAGAAG TTTATATTGA TATTAATAAT GATAAAGCAA CAACTTATAG CACAAATGAT TTTCAATATA CATTTGGCTG GAATAAAGGA ACAACGGTGA GTGTATTGCC TGCAGGCCGC TCTGTGGCTG GCATTACCTA TACCGCGGTT GCACGTACCG GTGGTTATAT TATAGAGGCC CGTATTCCAT GGGCAACGAT ACAGGGCACG CCTGCTGCCG GCCAGCTTGT GGGTATAGAC TTTATGATCA ATGATGATGA TGATAACGGT GTACGGGATG GAAAGCTTTC CTGGAATGCT GCTACAGATA ATGCATGGCA GGATCCTTCC TTATTCGGTA CGGCAATTTT ACAAGGCGCG GTACCGTGTA CAACACCAGC GGCACCAACA GTTACCGCAA CAGCGGCGTA TTGCCAGAAT GCACCTGCTA CTGCATTGAC GGCAACCGGT ACCGGATTGA AATGGTATAC AGCAGCAACA GGTGGTACAT CTGCAGCTTC ATTGACGCCG GAAACAGGAA CTGTTGGCAC AATAAATTAT TATGTATCGC AAACAGTGAG CGGCTGTGAA AGTTCAAGAG CAGCGATTGC GGTAACGGTA AATGCCTTGC CGGCAGCAGT AATTACAACA GCAGGTGCAA CCACATTCTG TGCAGGCGGT TCGGTAACAC TTACATCAAG CACAGGTACT TCCTACGTAT GGAAAAGAGG TACAACACAG GTAGGCACAA CTGCAACCTA TGCAGCAACG GAATCCGGTT CTTATACGGT AGAAGTTACG AATGCAAATA CATGCAAAGC AACATCAGCC GCAACAACCG TAACGGTAAA TGCAGCACCA GCGGCACCAA CAGTGAGTGC AACCGCAGCG TATTGCCAGA ATGCAGCAGC AGCTGCATTA ACGGCAACCG GTACGGGATT GAAATGGTAT ACAGCATCAA CGGGCGGCAC AGCTGCTGCA ACGCTGATAC CGGAAACAGC AACCGTTGGT TTAACCAATT ATTATGTATC GCAAACTGTA AGCGGATGTG AAAGTCCGAG AGCAGTGATT GCGGTAACGA TAAATGCTTT ACCGGCAGCA ACAATCACAG CAGGTTCTGA AACGACATTC TGCGCAGGCG GTTCTGTTAC ACTTACAGCC AGTACAGGTA CTTCTTATGT ATGGAAGAAT GGAAACACAC CGGCAGGTAC AGCTGCAACG TATGTAGCAG CTTCAGCCGG CTCTTATACG GTAGAGGTAA CAAATACGAA CAATTGTAAG GCTGTTTCAG CAGCTACCGT TGTGGCGATA AATTCCTTAC CGTCCGCTCC GGCGGTAACG GCAACTGCAG CGTATTGTCA GCAGGCAACG GCTATTCCGT TGACAGCAAC CGGAACTGCT TTGAAATGGT ACGAAACAGC CAGCGGCGGA ACTGCCCTGG CAAACACACC TATACCTTCA ACAGCTGCAA CAGGTAATAC CAGCTATTAT GTATCGCAGA CAACAAACGG CTGTGAAAGT CCGCGCGCAA TGATCACGGT AACAGTCAAT GAATTGCCGG CAGCAACGAT TACACCAACA GGTTCTACTG CTATTTTATC GGGAGGCAGT GTATTGTTAA ATGCAAACAC AGGTTCTGGC TTATCATATA AATGGTTTAG AGGAACAACT CCATTAAGCA CGGCATCATC GTATGCCGCT ACTTCAGCAG GCGATTATAC CGTAGAGGTT ACAAATGCGA ATAACTGTAA AATGGTTTCT GCAGTAACTA CTGTAACGGT AACAACCAAT CAGCCTTCGG TTATTACGAT CACATCGCCG GCAAACAACA CAAATGTATC TTCTCCGGTT TTGATTACGG TAGATGTCTC TGATCCGGAT GGTTCTATTG AACAGGTTGA ATTCCTGGAT GGTGATATCG TAATCGGAAC AGCTGCATCA GAGCCATACA GCTTTACATG GAATGATCCG GGAACAGGAT CACATACCAT TACGGTGCGT GTTAAGGACA GCAACGGCGG TATTACTACT TCTTCTCCGG TGATCATCTT TACAGGAATT ACAACAGGGA TTTCATCCGG TAACAGCATG TACAGCAATG TATATCCTGT TCCGGCAAGA GATGAAGTAA TTGTTGAAAC GGATCTGGAT CTTTCAGGAG CAACGGTTAA AGTTGTAAGT ATTTTGGGTG AAGAAGTTTC TTTGCCGGTT GCTATCAATG GAACAGATGC AAAACTGAAT GTAGCAGAAC TGTCAGACGG AACATACATT CTGATTATCA ATCAGCAGTC AAATGTTATC ACAAAGAAAA TCAGTATTAT AAAATAA
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Protein sequence | MKKSVSVFVA LFCCAFFYAV SSKAQIPAAY QVGTWKNFKP AAVTYTFDDN TSNQIPVAIP LLNTYGFKST IFAVTQSMSP NWANMKTAAN AGHEIGSHTV THNNLNGAAI SAQDTELKNS QATINSNITT QKCYTVAYPN CNIGDVSTIQ KYYIAGRTCS GQIIPSSPTD FYNLSSIICG NTGVNTANDM NTRVNSAKTS GGWCVFLIHG IDGDGGYSPL ASSVLSSHLS YVNTNTADYW VGTFGNVAKY IKERNAMSIA ETTVTADSLR MTPTDNLDNT IYDAAITIRR QLPSGWTAAR VMQAGTIITS TIVTVNTVKY VQFDVVPDKG VYTLANAAVT NPGCATAAPT VSPVSFVQGA AATALTATGT ALKWYGTNAT AGTASTTAPT PSTTAAGSTT YYVSQTLNGC EGPRAALVVT VTASGTGNTS CNETGQGAYY TGVYRNMFKE LLNKTDAEVK AKVDAAFQHF FYGSSTQKLY YEVGTDMAYI QDIANNDVRS EGMSYGLMIC VQLDKKAEFD KLWKWTKTYM QHNSGNLDGF FRWQLNTNGG VIDNNPAPDG EAYFITALFF AANRWGNGTG IYNYSAEAQA VLSKVQSKTG AGGINSLFNT NSKLITFGPN GGSYDFTDPS YNLPGFFELW GRWSTSNTAF WQQTPAAARK LIRDASHSTS GLTADYSNFD GTPKTTSFNS DSHRFMYDAW RTIMNLGMDY HWFKVDAQQP VIAERYLNFF KNQGSNYKNH YDWNGSNAGG DHSTGLVACN AVASLAVTNT TLTTPFVQEF WSTGLPTGTY RYYDGMLYLL GMLNCSGNFK VWKPECPNTC ATPAPTVAAA VINYDLNAAA TALTATGTAV KWYTVATGGT ALTTAPTPST SVTGTMVYYA AQTLNGCEGP RVSVTVNVVN NYKIYKVSAP VAVDGTVDEV WNNVNVLPAA ATKLLSGTVT NSADLSGNFK ALWDDTYLYI LADITDDVKI SESTNAYDDD GVEVYIDINN DKATTYSTND FQYTFGWNKG TTVSVLPAGR SVAGITYTAV ARTGGYIIEA RIPWATIQGT PAAGQLVGID FMINDDDDNG VRDGKLSWNA ATDNAWQDPS LFGTAILQGA VPCTTPAAPT VTATAAYCQN APATALTATG TGLKWYTAAT GGTSAASLTP ETGTVGTINY YVSQTVSGCE SSRAAIAVTV NALPAAVITT AGATTFCAGG SVTLTSSTGT SYVWKRGTTQ VGTTATYAAT ESGSYTVEVT NANTCKATSA ATTVTVNAAP AAPTVSATAA YCQNAAAAAL TATGTGLKWY TASTGGTAAA TLIPETATVG LTNYYVSQTV SGCESPRAVI AVTINALPAA TITAGSETTF CAGGSVTLTA STGTSYVWKN GNTPAGTAAT YVAASAGSYT VEVTNTNNCK AVSAATVVAI NSLPSAPAVT ATAAYCQQAT AIPLTATGTA LKWYETASGG TALANTPIPS TAATGNTSYY VSQTTNGCES PRAMITVTVN ELPAATITPT GSTAILSGGS VLLNANTGSG LSYKWFRGTT PLSTASSYAA TSAGDYTVEV TNANNCKMVS AVTTVTVTTN QPSVITITSP ANNTNVSSPV LITVDVSDPD GSIEQVEFLD GDIVIGTAAS EPYSFTWNDP GTGSHTITVR VKDSNGGITT SSPVIIFTGI TTGISSGNSM YSNVYPVPAR DEVIVETDLD LSGATVKVVS ILGEEVSLPV AINGTDAKLN VAELSDGTYI LIINQQSNVI TKKISIIK
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