Gene CHU_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1217 
Symbol 
ID4184665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1397305 
End bp1397730 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content43% 
IMG OID638071212 
Productanti-sigma regulatory factor; Ser/Thr protein kinase 
Protein accessionYP_677830 
Protein GI110637623 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAA TGACACCGAT AGTCCTGAAT AAAGACTCCA TAAATGTCTT TCGTGAAACG 
GATGTTGTAC CCTTCAGAAG CAGGGTTAAA GAGCATGCTG TAAAAATCGG CATGAGCCTC
TTAAATCAAA CCAAACTTAT TACCGGTGCC AGTGAGCTTG TCCGGAACAT GCTTAAATAC
GGAAACGGCG GTATTGTGCG GATTGAAATT GTAAGTAAGG GCCGCGATAC AGGAATCCGA
TTGATCTTTG AAGATAAAGG ACCGGGCATA CCGGATATTA ATAAAGCCAT GACAGATGGA
TTTACGACCG GCAAGAGCAT GGGGCTTGGT TTACCGGGCA CAAAGCGGCT GATGAATGAA
TTTAACATTA CATCTGAAGT AGGCGTGGGT ACTACGGTAA CGGTAATTAA ATGGAAAAAT
GGATAA
 
Protein sequence
MTTMTPIVLN KDSINVFRET DVVPFRSRVK EHAVKIGMSL LNQTKLITGA SELVRNMLKY 
GNGGIVRIEI VSKGRDTGIR LIFEDKGPGI PDINKAMTDG FTTGKSMGLG LPGTKRLMNE
FNITSEVGVG TTVTVIKWKN G