Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1213 |
Symbol | |
ID | 4184661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1389071 |
End bp | 1390177 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638071208 |
Product | cell wall biosynthesis enzyme |
Protein accession | YP_677826 |
Protein GI | 110637619 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.578129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAGC GTGTGTATCT CTCACCGCCG GATTTGTCCG GCAATGAATT CCGATACATA CAGGAAGCAT TAGAATCTAA CTGGATTGCT CCATTCGGCC CCCAGTTAGA TTCTTTCACG GAATTATTAC AAACACAAAC AGGTACATCT TTTGCAGTAC CTGTTAATTC AGGTACTTCA GCGATTCATT TAGCATTGCT TGCGTTGCAT ATTCAGGAAG GGGATCTTGT TTTTTGTCCT ACCTTCACAT TTGCCGCAAG TATTTTTCCT GTGCTGTATC AAAGAGCTAC CCCCGTATTT ATTGATAGCG AATCACATTC ATGGAACATG GATCCGGTAT TACTGGAACA GGCCATTCTT GATTCCATAG AAAATAAACA GAAACCCAAA GCAATTATTC TGGTTCATAT TTATGGCTTT CCGGCTATGC TGGATCAGAT ACAGGCTATT GCTGCTAAAT ATCATTTATA CCTTATTGAA GATGCTGCAG AAGCGCTGGG CTCTTCCTAC AAAAATAAAG CACTTGGTTC CTTTGGGCAT GCAGGCGCGT TATCTTTTAA TGGAAATAAA CTGGTAACAG GCGGAACGGG TGGTGCTGTT ATTACAAACG ATGAAGAACT TTTTAATGAA GTGCGTGTAC TGGCCAATCA AGCGAAAGAA GAAAAGCCGT ATTACGAACA CCTGCAGGTA GGATACAATT ACCGGATGTG TAATCTAAAT GCTGCTGTTG CATGCGCGCA GCTGGAACAG CTTGGACAAA AAATTAATAA AAAGAAACAG ATACGTGCGT GGTATGCGAT CCATTTATCT GGTGCAGCAA ATATAAAACA GGCTGATGCA GGTATCGATA ATGCCTGGCT CACCTGTGTT GAATTTGCAT CTGCGGAATC GCCGGAGAAA GTTCGGCTGG CCTTGGAAGA AGAAAATATT GAGAGCAGGA ATGTGTGGAA TCCCATGCAC AGACAACCTG TTTTTAAGGA TTGTACAGCG TATCTGAACG GCGTTTCGGA TGCTGTATTT GCGAACAGCC TGTGTCTGCC CTCAGGAACA CAACTGATTG AAAAAGATAT TATTCACATT ACTGATATAA TTAAGCGCAG TCTTTAA
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Protein sequence | MQKRVYLSPP DLSGNEFRYI QEALESNWIA PFGPQLDSFT ELLQTQTGTS FAVPVNSGTS AIHLALLALH IQEGDLVFCP TFTFAASIFP VLYQRATPVF IDSESHSWNM DPVLLEQAIL DSIENKQKPK AIILVHIYGF PAMLDQIQAI AAKYHLYLIE DAAEALGSSY KNKALGSFGH AGALSFNGNK LVTGGTGGAV ITNDEELFNE VRVLANQAKE EKPYYEHLQV GYNYRMCNLN AAVACAQLEQ LGQKINKKKQ IRAWYAIHLS GAANIKQADA GIDNAWLTCV EFASAESPEK VRLALEEENI ESRNVWNPMH RQPVFKDCTA YLNGVSDAVF ANSLCLPSGT QLIEKDIIHI TDIIKRSL
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