Gene CHU_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1173 
Symbol 
ID4183384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1352636 
End bp1353265 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content25% 
IMG OID638071170 
Producthypothetical protein 
Protein accessionYP_677788 
Protein GI110637581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000532359 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00880061 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACAGATA AATATACAAT CCGTGATTTC TTTGCTTATT TATTAATAGG AATTTTTCTC 
TTATTAACTC TATTATTTGA GTTTAAAGCT TCTTTATTTC ATTTTTTTCA AATATCACAA
AGAGGTATAA AAGACAATCC CGCAACAATA CTTTTTCTAT TAATTCCTGG GCTTTATTTA
TTAGGACATA TAGTTCATGG AGTTGATTTA ATAATTACTA AAATTGGTAT GTATATATGG
GATTTTAAGA AAAAAAGCTA CAAGAGTATA TTAATCAAGA GAACCTTATC TTTTTTGAAT
TTTGTAGTTA ATGGTTATAG ACAAGTTGGA ATTTTAAATT CTCAAAGCAC GCAAATAAAT
AATCATATTT CATTTAGAAA AAAAGTATGC GAACTACAAT ATGAGGGAAA GTATAGTAGT
TCTGAATATT GGAATTTAAT GAATGAATTA TTCAAAGGTT TAACCTTAAT CACATTTGGT
TGGAGTATAT ACTATTTAAC ACAATGCATT TTAAACTATT CTCTCATTTA TTTTTTATTG
ACTTGTTTGT TTTGGTATAG GGCAAGATTT ATGGTTGTAA ATTATGTATC TATGGTTAAT
AATACATATA ATATCATCTC TACGCCTTAA
 
Protein sequence
MTDKYTIRDF FAYLLIGIFL LLTLLFEFKA SLFHFFQISQ RGIKDNPATI LFLLIPGLYL 
LGHIVHGVDL IITKIGMYIW DFKKKSYKSI LIKRTLSFLN FVVNGYRQVG ILNSQSTQIN
NHISFRKKVC ELQYEGKYSS SEYWNLMNEL FKGLTLITFG WSIYYLTQCI LNYSLIYFLL
TCLFWYRARF MVVNYVSMVN NTYNIISTP