Gene CHU_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1170 
Symbol 
ID4183381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1351245 
End bp1351541 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content28% 
IMG OID638071167 
Producthypothetical protein 
Protein accessionYP_677785 
Protein GI110637578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00231167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00861166 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAACGCG GCAGTATCAT TTATAAATTG TGTATGTATT TATTCTGTAT CATGATAACC 
ATATTAATCA GTTTAATCCT GGTTCAGACA ATAGACAATA CGAGAGTATG CACTAAATAT
GTAGATTGTA TTGTTTTGAA ACGCATTAAA AACAATACTG TTATTGAAGA AACATATGTA
GATATGGATA CCTATATTAA AGCCATTGAA GCATTAAAAA TAGCTGAACA AGAAATCATT
GAACATAAAA AGGAAATAAG ACGATTGAAA ATATCTTCTA TAATACAAGT GTCCTAG
 
Protein sequence
MKRGSIIYKL CMYLFCIMIT ILISLILVQT IDNTRVCTKY VDCIVLKRIK NNTVIEETYV 
DMDTYIKAIE ALKIAEQEII EHKKEIRRLK ISSIIQVS