| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1145 |
|---|
| Symbol | yegM |
|---|
| ID | 4185200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1317778 |
|---|
| End bp | 1318893 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638071142 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677760 |
|---|
| Protein GI | 110637553 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTC CGCATAATAT AAAAGGTGTA AGTATTCTGC ATACTTGTAT GAAGAAGATC
AGACTATACG TAATTACCGG TATTGCCATA GGTATATTAA TTGCTGTAAA GCTTATTTTT
TTTCCTTCTC AGAAAGCCGG AGGCAACAGT TCAGGCAAAG ATAAACAGTC TGCTGTTCCT
GTAACGGTTT GTATTGTTGG AGATGATGCA TTTCAGGATC ATATTTATGC AAGCGGTACC
ATTGTTGCAA ATGAAGAGGC TGCATTAAAA GCAGAAGCAA CAGGTATTAT AACGTACCTG
AATCTTCCGG AAGGTCAACG TGTAAAGGCC GGAACATTAT TACTCAAAGT AAATGATGCA
GATCTTCGTG CGCAGCTTGA TAAAATTAAT ATAAGGTTAC GTCTGGCAGA AGAATCAGAA
GTACGGCAGA GAAAGTTGCT TAAACTGTCA GGCGTTAGCC AGCAGGAATA TGATATTGCG
CTGGCGGATC TGAAATCCTT ACTGGCAGAT AGTACATATC ATCAGGCATT GCTTGCAAAG
ACAGAAATAC GTGCACCATT TGACGGGGTA ATCGGTATTC GCAATGTAAG TATCGGAAGC
TACCTCACAC CTGCTGTTAC AGTTGCATAT ATTCACCAGC TTGATCCGGT TAAAATAGAT
TTTTCACTGC CTGAAAAATA TACCAGTCTT TTTAATGCAG GTGATGTCGT TCATTTTAAA
ACGGAAGGTT CTGCTGAAGT TCATACTGCA ACGATATCGG TGAAAGACCC GATGGTTGAT
GCAGGAAGCA GAAGTGTTCG TTATCGTGCG CTGAGCCGTA ACGCAGATGG CCGGTTGTTA
CCCGGTGCAT TTACTCATGT AGAACTTTTT CTGAAAGATA AATCAGGAAC ACTGTTTGTG
CCTACAGAAA CCATTATTCC ATTTTTAACA GGTAAAAAAG TTTTTATCGT GAAAAATGGA
TTGGCAGAAG AACGTATTAT AGAAACAGGC CTGCGTACCG CCGATAATGT ACAGATTCTT
TCAGGGCTTG CAGCAGGAGA TTCCGTTGTT GTTAAAGGTA ATTTTCAGCT GAAGAAAAAT
ACGCCGGTTA AAGTTGTACA AGGGAAAAAG AAGTAA
|
|---|
| Protein sequence | MFFPHNIKGV SILHTCMKKI RLYVITGIAI GILIAVKLIF FPSQKAGGNS SGKDKQSAVP
VTVCIVGDDA FQDHIYASGT IVANEEAALK AEATGIITYL NLPEGQRVKA GTLLLKVNDA
DLRAQLDKIN IRLRLAEESE VRQRKLLKLS GVSQQEYDIA LADLKSLLAD STYHQALLAK
TEIRAPFDGV IGIRNVSIGS YLTPAVTVAY IHQLDPVKID FSLPEKYTSL FNAGDVVHFK
TEGSAEVHTA TISVKDPMVD AGSRSVRYRA LSRNADGRLL PGAFTHVELF LKDKSGTLFV
PTETIIPFLT GKKVFIVKNG LAEERIIETG LRTADNVQIL SGLAAGDSVV VKGNFQLKKN
TPVKVVQGKK K
|
|---|
| |