| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1135 |
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| Symbol | uspA |
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| ID | 4185190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 1308341 |
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| End bp | 1309186 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 638071132 |
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| Product | universal stress protein |
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| Protein accession | YP_677750 |
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| Protein GI | 110637543 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00245865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTAGCAA TGATTAGAAA TGTATTAATT CCAGTAGATT TTAGTGATGT TTCAATGAAT
GCAATTGAAT ATGTGAAACA TCTGACCCGA AAAATGAGCT GCACGATTTT TTTGTTTCAC
AGCAAAAGAA TGATTGTAAC TCCTGATCAG GCTATACAAA CAATGTATAA TGGCATGTTC
GATGATGCTG ACGACTTAAA TTTAAATCAG CATATGGATG AACTGGCTGC CGGCCTGGCC
AGTGAATACA TTACAGTTAA TAAGGTTATC CGGATCGGTT CTTTAGCCGA AGATATCAGC
AATGTTGTAA AAGAACATAA TATAGATTTG ATTGTTTCCG GAACGAATGG AGCAGGCAAT
ATTGAAGGAC TGTTTTTGGG AACAAATTCA GTTGGTATAT TTAAGCACGT TACCTGTCCT
GTATTGATCA TTCCTTCAAA TTGTAATTTC AGACTTATAA AAAAAATCCT TTACGCTATC
GATTTTCAGG AAGGCCATTC AAAAGAATTA AAAAGAGTTT GCAGGTTTGC GGAACTGTTT
GATGCAGAAG TAAACGTTAT ATATATAAAT ACAGAAGCAT CTATATACAG CGATGCAAAA
GAAAAGCTGG ATCAGCTTGC AGAAATACAT GTCAATGAAA TTAAATACAA TAAAATTTCA
TATACTGTAA GCCACGATGA TACGGTATTT GAAGGGCTGG AAAAGGAAAT TGCTTCCGGA
TATATTGATG TAATTTGTAT GGCCACAGGT AAAAAAAGTT TTTTAGAAGA ACTGTTTTTT
AAAAGCAATA CAAAAGAAAT GGCCTTTCAC ACACGTATAC CTTTACTGGT TGTACATTTA
AATTAA
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| Protein sequence | MLAMIRNVLI PVDFSDVSMN AIEYVKHLTR KMSCTIFLFH SKRMIVTPDQ AIQTMYNGMF
DDADDLNLNQ HMDELAAGLA SEYITVNKVI RIGSLAEDIS NVVKEHNIDL IVSGTNGAGN
IEGLFLGTNS VGIFKHVTCP VLIIPSNCNF RLIKKILYAI DFQEGHSKEL KRVCRFAELF
DAEVNVIYIN TEASIYSDAK EKLDQLAEIH VNEIKYNKIS YTVSHDDTVF EGLEKEIASG
YIDVICMATG KKSFLEELFF KSNTKEMAFH TRIPLLVVHL N
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