Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1127 |
Symbol | |
ID | 4186502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 1298086 |
End bp | 1299654 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638071124 |
Product | phosphodiesterase |
Protein accession | YP_677742 |
Protein GI | 110637535 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG [TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.23482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAT TAATTATGTA TATTCTTGCC ACCGCGGTTG TATCAATCGG TGTTGGTATT GTTGCCGGGA AAGCAATTTT CCAGAAAGAT TTTTCAAAAC AGGAAACAGA AGCCAAAGAA AAAGCAAACC TGATTATCAA AGAAGCTGAA TTAAAAGCGG AAGCAACAAA AAAAGACAAA CAGCTTGAAG CAAAAGAACA TTTCCTGAAG CTTAAAACAG AGTTTGAAGA AGATTCAAAC AAAAAGAAAA ACCTGATCAT CCAGAACGAA CAGAAGATCA AGCAACGCGA ACAGACCATT TCCAAGCAGA TGGAAACCAA TACACGCCGC GAAGCTGAAC TGGATTCATT GCGTGAAAAT CTTTCTTCTC AGTTGGAGAT TCTGAACAAA CGTAAAGAAG AACTGGAAAA ACTGAGACAT TCTCAGATCG AAAAATTAGA GAAAATTGCT GGCCTTACGG GTGAAGAAGC GAAAGCGCAA TTGATGGATA CCATCAAAGA AGAAGCGCGT ACGGAAGCAT CTTCTTATAT TAAACGCATC ACGGACGAAG CTAAAATGAC GGCTACCAAG GATGCGAAGA AAATTGTTAT TGAAACCTTA CAGCGTACAG CTACTGAAAA TGCTGTTGAG AACTGCGTAT CGATCTTCAA TATTGAAAGT GATGACATCA AAGGTAAAAT CATTGGCCGT GAAGGCCGTA ACATCCGTGC GCTTGAAGCT GCTACCGGTG TAGAGATCAT TGTAGATGAT ACTCCGGAAG CGATCATTAT TTCAGGCTTT GATCCGGTAC GCAGAGAGGT TGCCCGTTTA TCGCTGCACC GCCTGGTACA GGATGGACGT ATTCACCCGG CGCGTATTGA AGAGGTTGTT ACAAAAACAG CTAAACACTT AGACGAAGAA ATTATTGAGA TCGGCGAACG TACCGCTATT GACTTAGGCA TTCATGGTTT ACACCCTGAA TTGATCCGTC TGGTAGGCCG TATGCGTTTC CGTTCTTCAT ACGGACAGAA CTTATTACAG CACTCCAGAG AAGTTGCTAA ATTATGTGCA ACAATGGCTT CTGAACTTGG CTTGAATGCT AAGGTTGCGA AACGTGCCGG CTTGCTGCAT GACATTGGTA AAGTATATCC GGATGAACCT GAATTGCCGC ACGCCATTTT GGGTATGGAA TTAGCCAAGA AATACAAAGA GTCTGCTGAG ATCTGCAATG CAATCGGAGC TCACCACGAT GAAATTGAAA TGACGGGTCT TATCTCCCCG ATCGTTCAGG TATGTGATGC CATCAGCGGT GCTCGCCCTG GTGCACGTCG TGAGGTGATG GAACAATATA TCAAACGTCT GAAAGATCTT GAGCAGCTTG CACTGTCATT TGATGGTGTA TTGAAATGTT ACGCAATACA GGCGGGTAGA GAGCTGCGTA TCATGGTTGA TGCAGAAAAC GTATCGGATG ATAAAGCAGG TATCCTGTCG TTTGATATTG CGCAGAAAAT TGAAAAAGAA ATGCAGTATC CGGGCCAGAT CAAAGTAACG GTTATCCGTG AAATGCGTGC CGTGAACTTT GCGAAATAA
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Protein sequence | MSELIMYILA TAVVSIGVGI VAGKAIFQKD FSKQETEAKE KANLIIKEAE LKAEATKKDK QLEAKEHFLK LKTEFEEDSN KKKNLIIQNE QKIKQREQTI SKQMETNTRR EAELDSLREN LSSQLEILNK RKEELEKLRH SQIEKLEKIA GLTGEEAKAQ LMDTIKEEAR TEASSYIKRI TDEAKMTATK DAKKIVIETL QRTATENAVE NCVSIFNIES DDIKGKIIGR EGRNIRALEA ATGVEIIVDD TPEAIIISGF DPVRREVARL SLHRLVQDGR IHPARIEEVV TKTAKHLDEE IIEIGERTAI DLGIHGLHPE LIRLVGRMRF RSSYGQNLLQ HSREVAKLCA TMASELGLNA KVAKRAGLLH DIGKVYPDEP ELPHAILGME LAKKYKESAE ICNAIGAHHD EIEMTGLISP IVQVCDAISG ARPGARREVM EQYIKRLKDL EQLALSFDGV LKCYAIQAGR ELRIMVDAEN VSDDKAGILS FDIAQKIEKE MQYPGQIKVT VIREMRAVNF AK
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