Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1110 |
Symbol | |
ID | 4186486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1288327 |
End bp | 1288830 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638071108 |
Product | hypothetical protein |
Protein accession | YP_677726 |
Protein GI | 110637519 |
COG category | [S] Function unknown |
COG ID | [COG3832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000475267 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAG ATTTAGCCCT TGATTTTTCT GTCAATAAGG AAAACAAGAC CATTACAATT AAAAGAGAAT TTGCAGCAGT ACGTGCAATC GTTTGGGAAG CGTTTACAAG AGCAGAAATA CTGGATCAGT GGTGGGCGCC AAAACCATGG AAAGCTAAAA CAAAATCAAT GGATTTTAAA GAAGGTGGTA CGTGGCTATA TGCTATGGTT GGCCCGAATG GCGAAGAACA CTGGTCTATT TGTGAATATG CAATCATTAA ACCGATAGAA CGTTTTACCG GTAAGGATGG ATTTACGGAT GCAAGCGGAA AGCTTAATAC TGAGATGCCG CGATCAAACT GGGATATGCG TTTTATTGAC AAAGGTGAGA TCACCGAAGT GCAATATCAC ATTTCCTATG ACGATGTAGC ACAGCTGGAA GCTACTATAC AAATGGGCTT CAAAGAAGGT ATTACCATGG CTATGGAAAA CCTGGATGAA TTACTGGTAT CGGGTAAAAA ATAA
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Protein sequence | MRTDLALDFS VNKENKTITI KREFAAVRAI VWEAFTRAEI LDQWWAPKPW KAKTKSMDFK EGGTWLYAMV GPNGEEHWSI CEYAIIKPIE RFTGKDGFTD ASGKLNTEMP RSNWDMRFID KGEITEVQYH ISYDDVAQLE ATIQMGFKEG ITMAMENLDE LLVSGKK
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