Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_1101 |
Symbol | |
ID | 4187148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 1275406 |
End bp | 1278141 |
Gene Length | 2736 bp |
Protein Length | 911 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638071099 |
Product | alpha-tubulin suppressor |
Protein accession | YP_677717 |
Protein GI | 110637510 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [Z] Cytoskeleton |
COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGTGTTTAT CAAGATTCAT AATAAATCCG GCTGGAAAGA AATACGGAAT TGTGATGCCG AAAACACATT ACAATATATA CCACCCGCCC GGGTTGTATT CCCAAGCCCC GGATTTTAAT CCCGGTATCC CGGGCCTCAC CAATCTATTG TGCTTCCAGC AGTGCGGAAA AAATGGAATA ATAATCCAAA GAAATCAGTA CCTTGAAGCA TATTTTCCAA TACATCAATT TTATTCTTCT ATGACTAAGG TTTTTTCTAT CATTCTGTTA TGTTCCGCTT TTATTTCTTC ATCTGTTTCT GTTTACGCTC AGTTTAACAG AAGCGATACC AGAAGATCGG TTCCGTATAC GGCCAATTAT CAGCGTATGG CTACGGGTAA TAATTCGGAT CATAGTTTTG AGATCCGAAG CGGAGAGCTC TGGGGCTGGG GCTACAATAG CAACGGGCAG TTGGGGGATG GTACAACCAT GGACAGACGC ACACCTGTTA AAATCGGCAT TGATATAAAC TGGGTAGCTG TAGCTACCGG ATCATCTTAC ACGCTGGCTT TAAAAGCTGA CGGCACACTC TGGAGCTGGG GCAAAAACCA AAGAGGGCAG CTTGGCGATG GCACAACCAT TGACCGGCAT AGTCCGGTGC AGATTGGTAC AGAGCAAACA TGGACCGGTA TTGCAGCCTG TTTTTCATCC GGAATTGGTA TTAAAGCAAA TGGCACACTT TGGACATGGG GCTTTAATAA CGGCGGTGAA TTAGGCATTG GAAACAACGA TGAAAAACAC ACACCTGTGC AGGTCGGTGC CGATCAGAAT TGGCTGTATG CCGTGGCAGG AAGCAATCAT ATCGTTGCTT TAAAGGTAGA TGGTTCTCTT TGGGGCTGGG GTTTAAATGA AGCAGGAGAA ATAGGTAATG GAAATACTGT TCAGCAGGAC AGTCCCGTGC GTGTTGGTAC AGACAACGAC TGGACAACGC TTGCTGCCGG CTCAAATCAT ACACTTGCTA TAAAATCAAA CGGAACCTTA TGGGCATGGG GGCATAATGT ACGTGGGAAT CTTGGCAATG GAACGGCTAC ACTTGATCCG GCAACACTTC CGGTACAGGT CGGAACGGAT GCCGATTGGA TAAGAGTTTC TGCTGGTCTG GATCACAGTG TTGCATTGAA AGCCAACGGA ACTCTCTGGG CCTGGGGCTA CAATGTACGC GGACAGCTGG GTTACGGATC GGGTACAGAT AAACACCTGC CTGTGCAGAT CGGCACAGCA CATACATGGG TAGCGATCAA TGCCGGCACA TACCACACCA TCGGAGTAAA AGCTGACGGC AGCCTGTGGA CATGGGGAGA CAATACAAAC GCACAATTAG GTGACGGCGG CACCGCAGAT CAACCTGTGC CGCACAGCAT CAGAACGGCA CCCGATGACT GGATCTCCAT TGCCGCCAGC AATGCATTCA GTATGGGCCT GAAAGCGAAC GGAACAATCT GGACCTGGGG ATTAAATCCA TTTGAGACGG ACGGCCAGTA TAAAAACAGC AGTCCGGTAC AGACAGGTTC CGATCAGAAC TGGAAAAGTA TTGCCACAGG CAGTAATTAT ATATTGGCAC TCAAAGCAGA TGGGACACTT TGGGCCTGGG GCGATAACTT TTCCGGGCAG TTGGGCGATG GAACCGAACA GCCCAGAATG CTTCCGAAAC AAATAGGAAC GGCAACAACC TGGGTAAGCA TTGCCGCTGC CAGTGGTGTA CAAAGTTTTG GTATTCAGGC AGACGGTTCA TTGTGGAGCT GGGGCCATAA TTACGATGGG GAATTAGGTC TCGGAACAAA TCTTAAAACA CTTGTACCTA CCAGAGTCGG CACCGGTACT GACTGGATCA GTATTAAAAC CGGTGTCGGG CATACCTTGG GCATTAAATC AGACGGTACC CTGTGGGGCT GGGGTACAAA CAGACAGGGG CAGCTGGGCG ATGGTACGCT GGTGAACAAG TATGTGCCGG TACAGCTCGG GACAGACCGG GACTGGATCA ATATTGCCGG CGGAACGATT CATAATATTT GTCTCAAATC AAACGGAACG CTGTGGGCAT GGGGCAGGAA CAACTATGGC CAGGTAGGAA CAGGAAATTT AATTACCCAG GACCGCATGG TTCAGATCAG CGCAGAGCAA AACTGGATCG ACGTGTATGC ATCGCTGGAT CAGAGTTTCG CGATCCGGGC TGATGGCAGC CTTTGGGCAT GCGGCTTAAA CAGCAGCGGA CAATTGGGCG ACGGTACTTC GGTAGACAGG GCAGCGATGG TTGCCGTAGG CACCAATCAG AAATGGATAA GCCTCGCAGC CGGCAATTAT CATACGCTTG CCTTGCCGGT AAACAGGATT CAGTATTGCG GTACAGGCAC TGCGTATTAT GGTGAACTGG GAGATCATGT CTTTGATAAT CCGAATAAAA CAGCATTCGA TTGCCTTGAT AACAATATTA CTACACCAAT CAATATACAG GACAATAATC ATGCACCGGT ATTGCTTGTG TATCCCAATC CATCGGCCGG TTCCTGCACC ATCATCGGTA ACAGAGATGC CATGTATATC ATAACCAATG AACTCGGCCA GATGATCCGC TCCGTTTCCT TAACAGAAAA CAATCAGTAC GCGGTAACAA TTGAAGGATT AAATACAGGA ATGTATTTTG TTACAGGTAT AAATAATCCG CATGCAGGCA ATTTGAAATT TATTGTCTTA CAGTAG
|
Protein sequence | MCLSRFIINP AGKKYGIVMP KTHYNIYHPP GLYSQAPDFN PGIPGLTNLL CFQQCGKNGI IIQRNQYLEA YFPIHQFYSS MTKVFSIILL CSAFISSSVS VYAQFNRSDT RRSVPYTANY QRMATGNNSD HSFEIRSGEL WGWGYNSNGQ LGDGTTMDRR TPVKIGIDIN WVAVATGSSY TLALKADGTL WSWGKNQRGQ LGDGTTIDRH SPVQIGTEQT WTGIAACFSS GIGIKANGTL WTWGFNNGGE LGIGNNDEKH TPVQVGADQN WLYAVAGSNH IVALKVDGSL WGWGLNEAGE IGNGNTVQQD SPVRVGTDND WTTLAAGSNH TLAIKSNGTL WAWGHNVRGN LGNGTATLDP ATLPVQVGTD ADWIRVSAGL DHSVALKANG TLWAWGYNVR GQLGYGSGTD KHLPVQIGTA HTWVAINAGT YHTIGVKADG SLWTWGDNTN AQLGDGGTAD QPVPHSIRTA PDDWISIAAS NAFSMGLKAN GTIWTWGLNP FETDGQYKNS SPVQTGSDQN WKSIATGSNY ILALKADGTL WAWGDNFSGQ LGDGTEQPRM LPKQIGTATT WVSIAAASGV QSFGIQADGS LWSWGHNYDG ELGLGTNLKT LVPTRVGTGT DWISIKTGVG HTLGIKSDGT LWGWGTNRQG QLGDGTLVNK YVPVQLGTDR DWINIAGGTI HNICLKSNGT LWAWGRNNYG QVGTGNLITQ DRMVQISAEQ NWIDVYASLD QSFAIRADGS LWACGLNSSG QLGDGTSVDR AAMVAVGTNQ KWISLAAGNY HTLALPVNRI QYCGTGTAYY GELGDHVFDN PNKTAFDCLD NNITTPINIQ DNNHAPVLLV YPNPSAGSCT IIGNRDAMYI ITNELGQMIR SVSLTENNQY AVTIEGLNTG MYFVTGINNP HAGNLKFIVL Q
|
| |