Gene CHU_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1099 
Symbol 
ID4187147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1274832 
End bp1275347 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content44% 
IMG OID638071098 
Producthypothetical protein 
Protein accessionYP_677716 
Protein GI110637509 
COG category[S] Function unknown 
COG ID[COG5500] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC ACCTTAAAAT AATAGAAATG AAAACGCAAT TCTGTATGAT TGCAGCTATT 
GTATCTACTG GTATGATGGC GGGCATCTTT TTCACCTGGA CAAATGCCGT AACTCCGGGT
ATCGGCAGGC TGGACGATAT GGGCTATCTC ACGGCATTTA AATCCATGAA CAAAACTATA
CTGAATCCGC TGTTCTTTGT TCTGTTTTTT CTGCCTCTGT GTGCGATTCC ACTGACAGCT
TTTTTGAAGT ATCAGGAAGG AAACCAGCCT GCGTGCATTC TGCTTGCGGT GGCGGCATTG
CTGTATGTTG CCGGCTGCAT CTGCGTTACG GTCTCCGGGA ATGTGCCGCT GAATGATCTG
CTCGAAAAGA CAGATTTGAT AAACAGTAAT GTACAGCAGT TGACACAACT CAGATCAAGT
ATTGAAGTGA AATGGAATCT GTTTAACCTG ATCCGGACAG TTGCTTCTGT AATGTCTTTT
TCTTTATTAG TGATAAGCGT GTGCGTGAAG AGGTGA
 
Protein sequence
MAEHLKIIEM KTQFCMIAAI VSTGMMAGIF FTWTNAVTPG IGRLDDMGYL TAFKSMNKTI 
LNPLFFVLFF LPLCAIPLTA FLKYQEGNQP ACILLAVAAL LYVAGCICVT VSGNVPLNDL
LEKTDLINSN VQQLTQLRSS IEVKWNLFNL IRTVASVMSF SLLVISVCVK R