| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1087 |
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| Symbol | ydiS |
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| ID | 4184364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 1265419 |
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| End bp | 1266573 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638071086 |
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| Product | electron transfer flavoprotein |
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| Protein accession | YP_677704 |
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| Protein GI | 110637497 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.384904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.110599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCTA CATCCAATAC ATCGTTTGAT GTAATCATTT TAGGTGCAGG CCCTGCCGGA
TCTACGGCTG CACTTGCTCT TCAGAAAAGC AACCTTACTG TTGCCTTACT GGAAAAAGAG
CTTTTTCCCC GGGATAAAAT ATGCGGAGAC GCATTATCCT GCGTTGCAGA ACGTGTGCTT
AAACAGATTG ATCCCTCCTT AGAACAGGAA CTGCTGCTCT ATTCAGAAAA AACGGTAGTG
AATAAAGCGC GTGTATATAG TCCTGAATTT CGTTCTATCG TATTGAATTT TTCAAAACGC
GGACATTGTA TCAAACGCCT GGATTTTGAT AACTGGCTCT TTGAAAAAGC GAATGCAAAA
AACATTGAAG TTTTTCAACA GGCAAAGGTA ACGGATGTAC GTATTGATAA TTCAGGCGCT
GAAGTAGTTT TGCAGGATGG GACAATACTG CATGCTGCTA TAGTGATCTG CTGTGACGGT
GCACACTCTG TTGCGGCCAG GCAGCTTACA CATTTAAAAC TGGACCGCAA GCATTATGTT
GGCGCGGTGC GTCAGTATTA CCGTAATATC AGTGATACTG CCGGTAATGA ACTTGAGATT
TTTTTTCTCA AGGATTTTCT TCCCGGTTAT TTCTGGATCT TTCCTTTGAA GAACGGGGAA
GCAAATGTAG GGTTTGGCGC CTTATCAGCT ATCATTTCAA AAAATAAAAT TGATCTGAAA
AAAAGTCTGC AGGAGATCAT ACAATCTGTT CCGCAATTAA AAGAACGGTT TAAAGATGCG
GAAGCAATGG AGACTGTAAA AGGTTTTGGA CTGCCGCTGG GTTCAAGGAA ACTGCCTATC
TCAGGAGCGC ATTTTATGTT GTGCGGCGAT GCGGCTTCGC TGATTGACCC GGTTACGGGA
GAAGGCATTG AAACAGCCAT GGAGAGTGGC AAGTATGCGG CGGAACAGGC CATCAGGTGC
TTTGAAAGCA CGGATTTTTC AGCAGCATGT ATGCAAGCCT ACGATCAGCG CATTCACAAA
AAAATGTTTA AGCGGTTCCG TCAGCATTAT GTATTACAGC GCCTGATCAG CGACCGCGTC
TGGTTCATCA ACTTGATGAT CCGGCTGGCG AATGTACCCT GGATCAACCG GTACTTTTAT
TCAAGGTTTG AATAA
|
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| Protein sequence | MKPTSNTSFD VIILGAGPAG STAALALQKS NLTVALLEKE LFPRDKICGD ALSCVAERVL
KQIDPSLEQE LLLYSEKTVV NKARVYSPEF RSIVLNFSKR GHCIKRLDFD NWLFEKANAK
NIEVFQQAKV TDVRIDNSGA EVVLQDGTIL HAAIVICCDG AHSVAARQLT HLKLDRKHYV
GAVRQYYRNI SDTAGNELEI FFLKDFLPGY FWIFPLKNGE ANVGFGALSA IISKNKIDLK
KSLQEIIQSV PQLKERFKDA EAMETVKGFG LPLGSRKLPI SGAHFMLCGD AASLIDPVTG
EGIETAMESG KYAAEQAIRC FESTDFSAAC MQAYDQRIHK KMFKRFRQHY VLQRLISDRV
WFINLMIRLA NVPWINRYFY SRFE
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