| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_1027 |
|---|
| Symbol | |
|---|
| ID | 4183764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 1183540 |
|---|
| End bp | 1188117 |
|---|
| Gene Length | 4578 bp |
|---|
| Protein Length | 1525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 638071025 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677644 |
|---|
| Protein GI | 110637437 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.275206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTTA AAAATAAATT TATCTTCCTG GTCGGATTGT TTATTTCTTC GGTACATGTG
TTTGCCAATG TAAGTGTTAC ATCTGCCGGC AACCTGAATC TATGCGTTGG TAATGGATTC
TCAACGATAG GGAAAATTAC GATTGCCGAA GGTGTCATGG CAGACTTTTC GTCGAATGCA
ACTGTGCAGA CGTATGAAAT AAATGCGCCT TCTAATTTTG AATTTAATCC TGGCAATGGC
TCTGTAACAG CTTCAGGGAA TGATATTACA TTCTCTGCCT TAACTGTAAC AGCAACAAAA
ATAACGCTGT ATTATCTGGC AACTGCAACG GCTACGGTAG ATAAGTTTGA ATTAACAAAC
ATTCAGATAA AAGCAACGAA TTCTTCCGGT TCACAAAATA TCGTGCGCAC AGGCGGTACC
GCAACACAGG CGGGTAATGC TGCTTATACA AATACACACG CATCTGTGAG CGCTAATCAA
GCTAATGTAA ATTTGAATTT AGGTTCATTA AATAATCTAT GTATCAATAG CGGTGATAAA
ACACTTTCCG GAGGCACTCC GGGGGGAGGT ACGTATCTGG GAACAGGTGT TTCGGGGTCA
ACATTCAGTC CGGTAGCAGC AGGGACAGGC AGTTATACGA TTACTTATAC GGCTTCACAA
AATGGCTGTT CGGGAACAGC GACGGCAACT ATCACCGTAA ATCCCAAACC ATCAGTAACT
TTTTTTGGAT TGGATAATAC CTATTGTTCA AATGGCCTGG ATGACCAGCT GACAGGCTTT
CCTTCCGGAG GGACTTTTTC TGGGAGTATG GCAATCAGCG GTACATTATT CAAACCATCT
GTACCATCTG TTGGTGTAAA AAATATTACT TATTCGTATA CAGATGCAAA TGGCTGTTCG
GGTGAAACTA CACAACAGAC AACTATTTTA GAGGCACCAA CTGTTTCGAT AACGTTAGAT
CCTGCTAAAA GTACCTATGC GATAAATGAT GTCCCTGTTA AAATTTCAGG TACACAAAAT
AACCCATCTT CAGGCGGAAC AATTATATTG AGTGGAAATG GCGTTAGTAA TTCAACGGCT
CTTTTTACTC CCTCTGCTGC AGGTGTTGGT ACACATATAA TTTCAAGAAC AATAAAAGCG
CCTAATGGAT GTTCTGCTAC AGAAACCAGA GAAATGACAG TATCTAATAC GAATAATATT
ATTATAAATG GTTTAGCTGA AAAATATTGT GAATATAATG CCCCTGTACT TTTATCAACA
AATTTAGGCA CAGGTACCTT CAGCGGCGAA GGTATTACAG AATTTGATGC TTCAACAGGT
ACAGCTACAT TTAATCCGGC ACTTGTTGAT TTCGGAAATC AGCAACAGGT AACGGTTACT
ATAAACCTCA ATTATGCAGG CCTTATTAAT TTTCCGCAGA CAACTACCAT TCACAAAAGA
CCACAAGTTA CAATTATACA GGATACGGTT GCACCTAATT TCAGAAAGAA GTTCTGTAAT
CAGGATGCAA CAGTGCCTAT GAGTGTTTCT ACTTATCCAT CCGGAGGAAC AGGTGAATTT
TCAGGTTCTC CGGCTATAAG CGGAAATAAT TTTAATCCCG CTAATGCAAC GATTGGAAGT
ATAAATACAA ATACTGTATT ATATACCTAT ACAGATTTAA ATAATTGTAC AAATACAGAT
TCAAAAACTG TAATCGTTAA TGCCGTCACT ACAGGATTAG ATTTTAGCGG ATTGAATTCT
AAGTATTGTG ATAAAGCAAG CATAGCCGAA CTTAAACCGC TAAATGGGGA AACCTTATTT
AGCGGTGGTT TTTTTAGTGG GGTAGGTACT AATGGAAATA CTTTTAATCC AGGTATTGCG
GCTCAATATA ATAACAATAA TAAAAGTCAG GATTATGTAA TAAGCTTCAT TTATGTAAAT
GAAGAGAAAT GTCAGACAAT TGTAGAACAC ACAACAACAA TAATTCTATC ACCACAGGTG
ACTCTTTTGG GATTCAATCC CAAAAGAGAA TATTGTTTGG GTGATAATCC TGTGACATTA
ACAGGTGTAG TATCAAATAG TACACCAGGA GCAGGGGTAT ACTCGATCAA GCCTCTTTTG
AATACAGAAC TAGATGATAA TACGTTGAAT GGTAATATAT TTTATCCTGG AAATTCAACC
AATGCCGGAA CATACAGGGT GTTATATAAC TATACCGAAA ATACTTCCAA TTGTACAAAT
ACGGATAGTG TAACTGTAAT TGTGCATTCA ATTCCGCAAG TTTATTTTTC GGGATTAAAA
TCAAAATACT GTGATAAAGA AGAATTATCT AATTTAACAG CGTTTCCGGC ATATGTGGCT
GGTGCTTCCA GCTTTACAAG CAGTCCGGTA GTAAGCGCTG TTGCTGGTAC TATATTTTCT
CCTTCTTTAG CAGGTGTTAA TACACATTAT ATTACATACA CGTATACGGA TAATAATGGA
TGTAAAGGTG ATTCGACAAT AAAAACTGTT GTGTATGAAA AACCTAAAGC AAGCTTTACC
ATGTCTTCAT TTTGTGAAAG TGATATTATC TTATTTAGAG ACTCTTCATC TGTACTTGTT
TCCCCAACTA GTGCCCCAAG TGCATACAAC AATTGGAAAT GGGTTATTGA TGACAAAACA
GTTATAAGGA AAGACCTGGA TACTGCATTA TTGGCAGGAA GCCATAAGTT TTCATATATT
ACTATTACAG ATAAAGGTTG CAGTGATACA ATTACTAAAA ATGTTACCAT TGGTTCGTAT
CCAAAAACAA AATTTACATG GGATAAAATT TGTAATAAAG AAGCAACAAA GTTTTTTAAT
AATTCTACTA TCGATATTGG TGCTATTACG AATGTATACT GGAAATTTAC TGAAGGTGGC
TCTGAAGAGA ATATAGCATT AAATAATAAT GTTAATGGCA ATACGACTCA TACTTACACT
ACGCCTGCTA CATATAAGGT TACATTGAAA GCTAAGACAA ATTATAATTG TATTGCAAGT
GATACCCAAA AAGTATTTAT TCTCCCTTCT ATAGATATAT CATCAGATGT ACCTTATTCG
AATAACTTTA ACAATCTTGT AGGTGATTGG GTTTCAAGTT CAGAAACAGA TACCTTATCG
TCATGGGTAT TAGGTCAGCC AAATAAATCC ATAATAAAAT CTGATAGTGC AGCTTGGGTA
ACAAGTCTTA CTAAATCACA TAATCCCAAT GAAATCTCTT ACGTATATAG TCCTTGTTTT
ACATTAACGG ATATTACAAA GCCAATGATT CATATGGATA TTTGGTCTGC AACCATTCAA
AATATTTCCG GTGCAAATTT GCAATACGCT GTTGATGGTA CGAATTGGTT TACATTAGGA
GAACCTAATA AATCCGGTGT TAACTGGTAC AACAACACAT CTAATATTGC TGCCCGTCCA
TCGGGACCAC TTTCTTTAAA TCAATACGGC TGGACGGGTA CAGATTCTGC AGGATGGAAA
AATGCACGTC ATATTTTTGA TAAAGAATTA GGCACGAATA AAAATATTCG TTTCAGAATA
TCCTTTGCCG GAACTACGGA TACAACAAAT GGCTTTGCAT TTGATAATGT CTGGATCGGA
GACCGTAAAC GGTTGATGCT TGCCGAACAC TTTACCAATA ACTCCAGTTC GAATACCGTG
CAGGACAATG TTGAACTGAA TAAATTATTG AATGCAAATC AAAAGGATGG TATACCTAAA
GATATTATTG CTTTGCAATA CCATACAGCC TTTCCCGGAT CAGATCCAAT GTATAGCCGT
AACATACCGG ATGCCGGTGC AAGGTCGCTT TATTATGGTG TTACACAGGT GCCGTACTCA
ACAGTAGATG GATCTTATTA CAAAGGTAAT ACGGCACGTA TCACACAAGA ACTTATTGAT
ACGCGTTCAT TATACGACCC GGCGTTTGAA ATAAAATTAG AACCAATTTT AACGGCAAAT
ACTATTTCCG GAAGTGTAAC TGTAAAAAAT ACAATGCCGG TAAATAATAA TGTAACGGTA
TATATATCTG TGCTTGAACG CTACGTGAAT AATATAACCG GAATAAATGG TGAAAAAAAC
TATGAGTGGG TGCATGCAAA GTTCCTGCCG GATGCTGCAG GTAAAAGTTT CTCCGGGAAT
TGGTCAAAAG ATAGAACAGA AACCGTTCCC TTTATCTGGT CATTTACGCC ATCAAATATA
TATAATCCGG ATAAACTTGC TGTGATTGCT TTTGTACAAA ATAATGTTAC AAAAGAAATT
TATCAGGCAG CGTACAAAGG ATTAGGTGCA GATGTAATTA CAAGTGTTTT TGATCCGAAT
GAGTCAACAT CAACAGTCAT GATGTATCCA AATCCCGCTA ATGATCTGGT ACATGTTATC
CTCAGCGGAA CATTATCCGG TGATTATTCC TGGTGTGTGA TTGATGGTCT GGGCAAAGTT
GTTGATCAGG GTATTGCAGC AGATCAGACA GATGGTTTTG TAGTAAATAC ACAACACTAT
GCAAGCGGTT TCTATACGCT TCGCTTAAGT AATCAATCCA GTGGTATTAA AACCCAGAAG
TTTGTGGTGG TACATTAA
|
|---|
| Protein sequence | MVLKNKFIFL VGLFISSVHV FANVSVTSAG NLNLCVGNGF STIGKITIAE GVMADFSSNA
TVQTYEINAP SNFEFNPGNG SVTASGNDIT FSALTVTATK ITLYYLATAT ATVDKFELTN
IQIKATNSSG SQNIVRTGGT ATQAGNAAYT NTHASVSANQ ANVNLNLGSL NNLCINSGDK
TLSGGTPGGG TYLGTGVSGS TFSPVAAGTG SYTITYTASQ NGCSGTATAT ITVNPKPSVT
FFGLDNTYCS NGLDDQLTGF PSGGTFSGSM AISGTLFKPS VPSVGVKNIT YSYTDANGCS
GETTQQTTIL EAPTVSITLD PAKSTYAIND VPVKISGTQN NPSSGGTIIL SGNGVSNSTA
LFTPSAAGVG THIISRTIKA PNGCSATETR EMTVSNTNNI IINGLAEKYC EYNAPVLLST
NLGTGTFSGE GITEFDASTG TATFNPALVD FGNQQQVTVT INLNYAGLIN FPQTTTIHKR
PQVTIIQDTV APNFRKKFCN QDATVPMSVS TYPSGGTGEF SGSPAISGNN FNPANATIGS
INTNTVLYTY TDLNNCTNTD SKTVIVNAVT TGLDFSGLNS KYCDKASIAE LKPLNGETLF
SGGFFSGVGT NGNTFNPGIA AQYNNNNKSQ DYVISFIYVN EEKCQTIVEH TTTIILSPQV
TLLGFNPKRE YCLGDNPVTL TGVVSNSTPG AGVYSIKPLL NTELDDNTLN GNIFYPGNST
NAGTYRVLYN YTENTSNCTN TDSVTVIVHS IPQVYFSGLK SKYCDKEELS NLTAFPAYVA
GASSFTSSPV VSAVAGTIFS PSLAGVNTHY ITYTYTDNNG CKGDSTIKTV VYEKPKASFT
MSSFCESDII LFRDSSSVLV SPTSAPSAYN NWKWVIDDKT VIRKDLDTAL LAGSHKFSYI
TITDKGCSDT ITKNVTIGSY PKTKFTWDKI CNKEATKFFN NSTIDIGAIT NVYWKFTEGG
SEENIALNNN VNGNTTHTYT TPATYKVTLK AKTNYNCIAS DTQKVFILPS IDISSDVPYS
NNFNNLVGDW VSSSETDTLS SWVLGQPNKS IIKSDSAAWV TSLTKSHNPN EISYVYSPCF
TLTDITKPMI HMDIWSATIQ NISGANLQYA VDGTNWFTLG EPNKSGVNWY NNTSNIAARP
SGPLSLNQYG WTGTDSAGWK NARHIFDKEL GTNKNIRFRI SFAGTTDTTN GFAFDNVWIG
DRKRLMLAEH FTNNSSSNTV QDNVELNKLL NANQKDGIPK DIIALQYHTA FPGSDPMYSR
NIPDAGARSL YYGVTQVPYS TVDGSYYKGN TARITQELID TRSLYDPAFE IKLEPILTAN
TISGSVTVKN TMPVNNNVTV YISVLERYVN NITGINGEKN YEWVHAKFLP DAAGKSFSGN
WSKDRTETVP FIWSFTPSNI YNPDKLAVIA FVQNNVTKEI YQAAYKGLGA DVITSVFDPN
ESTSTVMMYP NPANDLVHVI LSGTLSGDYS WCVIDGLGKV VDQGIAADQT DGFVVNTQHY
ASGFYTLRLS NQSSGIKTQK FVVVH
|
|---|
| |