Gene CHU_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_1003 
Symbol 
ID4186914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp1150756 
End bp1151922 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content39% 
IMG OID638071000 
Producthypothetical protein 
Protein accessionYP_677620 
Protein GI110637413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.315235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.113997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATATT TGACTATTAA CGTTTACTTC ATGAAATTTA TCAATACCAT AACCGTACTT 
CTTTTCAGTC TGCTGGTTTC AATTTGTACG CATGCACAAA ATCACAAAGA AATAGGGCAT
TTAGAATTTT CGGATACGCT CTATAATTTT GGTCCTGTAA ACGAATCACA AGGTGTATTG
TCGCATAAGT TTTCATTTGT AAATCTTGGT CCGGAATATT TTGTGATCGA AGATGTTAAT
CCATCCTGCG GCTGCATTAC ACCGGATTAT CCGACGGATA CCATTCATGC AGGAGAAAAA
GGTGAAGTTG TCATCTATGT AGATCTGGTG AATCACCCGG GCGTTTTTAA ACAAAAAGTT
GTCATAAAAG GAAATGCTTC CAAAGAGCCG ATTAATTTAT ATGTAAGTGG TTATGTAACG
CCTTCGCCCC AGCCGTTAGC GGATTGGGAA CGTACGTCTT CCTTTAAATA TAATACCATT
TACCTGCAAA AGAACTACGC GAATTTTGGT GTGGTTTCAA ATAAAAGCAT TGTAAGTATG
GAGATACCGG TATATAACTC GGGTACACAA TCTGTAAATA TACAACTGGA TAAACTGAAA
CTTCCTTCGT ATGCAAAAGT GAATTTGCTG CCGGTTAAAA TTGAATCGAA CCAGCGTGGT
GTACTGAAAA TATTCTTTAA TCCGAAAGAA GCCGGCATGC TGGGCTATTT TGCCGGGCAG
GTGGAAGTAG TATTTCTTTC CGGTTCAACA GTTACAAAAG TTCCGGTAGT AGTAACGGCA
ACAATTAAAG AAGTATTTAC TCCTGCAGAA CAGGCTTCGG TTGTTGGTCC CAGAATACAA
CTGGATAAAG GAGAAATTGA TTTCGGAACG ATAAAAACGG ACGATAAACA CACACGCGAT
ATCACTGTGG TGAACATTGG TAAAAGTGAC CTGCTGTTAA ATTCTATACG CACGTCTTGT
TCCTGTGTAG AAGCATTTGC AGATAAAACT ATATTAAAGC CGGGGGCATC AACAGTAATT
AAAGTTGTAT TTGATACACA AGACCGTACC GGCGCAGAAA ATAAGATTGT AAGTGTGTTT
ACCAACGATG CAGCCAATTC CATTGTTACC GTTAAGGTAA GGGCTGTTGT TACAGAAGAT
GTGCCTGCTC CTGCTGGCGG ACAATAA
 
Protein sequence
MLYLTINVYF MKFINTITVL LFSLLVSICT HAQNHKEIGH LEFSDTLYNF GPVNESQGVL 
SHKFSFVNLG PEYFVIEDVN PSCGCITPDY PTDTIHAGEK GEVVIYVDLV NHPGVFKQKV
VIKGNASKEP INLYVSGYVT PSPQPLADWE RTSSFKYNTI YLQKNYANFG VVSNKSIVSM
EIPVYNSGTQ SVNIQLDKLK LPSYAKVNLL PVKIESNQRG VLKIFFNPKE AGMLGYFAGQ
VEVVFLSGST VTKVPVVVTA TIKEVFTPAE QASVVGPRIQ LDKGEIDFGT IKTDDKHTRD
ITVVNIGKSD LLLNSIRTSC SCVEAFADKT ILKPGASTVI KVVFDTQDRT GAENKIVSVF
TNDAANSIVT VKVRAVVTED VPAPAGGQ