Gene CHU_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0869 
Symbol 
ID4184228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp993784 
End bp994860 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content41% 
IMG OID638070871 
Producta-glycosyltransferase 
Protein accessionYP_677492 
Protein GI110637285 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.746857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.684774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAG ATACTATATT ATTGATCTGG GACCGGATAG GCGACTATCA TCTTTCACGT 
GTAAAAGCAT GTGAAAAATT GCTTGGAGCA CCTGTATTTA CAGCTGATCT GGCAGGTACA
GATAACCTAT ATAAATGGGA TAGCATTGCA AAAACAACAC ATACGGTGCT TTCATCAAAA
CCTGCAGAGC AATCAGATAT CTGGAACCGT TTCCGCACAT TCCGCAGGAT TATTAAAACA
CATTCCATTG CTGTGGTTGC AATGCCATAC GGGCGTACGG AATATCATAT ATTTTTATTG
TATGCACGAT TAAAAGGTAT CCGTACAATT ATTTTTTCTG AATCCTGGTA TTCCAGGGGA
AAACTAAAAG ATTTCTTAAA ATCCCTACTG TTAAAATCAC TCGGTAATTA CTTCTTTGTT
TCCGGGAAAA GAGCGTTTGA TCATTTTACA AAAAACTATA AAATCAATCC GGAGAAAATT
GAAACGGGTT ATAGTGTAGT CGATAATAAT CATTTTCAGC GAAGGCTATT TACAGAAAAA
AAATATGTCT TAACCATTGC CCGTTACAGT GAAGAAAAAA ATCTTTCTTT TCTGATTGAT
AGTTATGCAA AATCAGTGAT CAGCAATACC TACAACTTAA TGCTGATAGG TGAAGGGCCG
CTTCGCCCTG CATTACAGTC CCAAATTGAT ATACTCGGCC TTTCAGACCG GGTTCAGCTG
GCAGGCTGGG TGCCTTATGC TGCATTGCCA AAAGCATATG CCGAAGCCGT TGTTTTTGTT
TTGCCAAGTT CTTTTGAACC CTGGGGGCTG GTAGTGAATG AAGCGATGTC GGCCGGTTTA
CCCATCCTGG TATCAGATGC CTGTGGGTGT ATGCCGGAGT TGGTAGCAGA AGGTGTAAAT
GGCTGGTCTT TTAATAGCAA TACGCAACAG GAACTGATTG AACGGCTTAA TGCTTTTGCG
GCCTTGAGTG AAAAGGGGAT AGAGATAACA GGAAAAAATT CTATGCAATT GATTCGTAAC
TACACACCCG ATACATGGGC AGGGTCCATA GCACGGCTGG CACAGGCTGG CAGATAG
 
Protein sequence
MSQDTILLIW DRIGDYHLSR VKACEKLLGA PVFTADLAGT DNLYKWDSIA KTTHTVLSSK 
PAEQSDIWNR FRTFRRIIKT HSIAVVAMPY GRTEYHIFLL YARLKGIRTI IFSESWYSRG
KLKDFLKSLL LKSLGNYFFV SGKRAFDHFT KNYKINPEKI ETGYSVVDNN HFQRRLFTEK
KYVLTIARYS EEKNLSFLID SYAKSVISNT YNLMLIGEGP LRPALQSQID ILGLSDRVQL
AGWVPYAALP KAYAEAVVFV LPSSFEPWGL VVNEAMSAGL PILVSDACGC MPELVAEGVN
GWSFNSNTQQ ELIERLNAFA ALSEKGIEIT GKNSMQLIRN YTPDTWAGSI ARLAQAGR