Gene CHU_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0859 
Symbol 
ID4184218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp982290 
End bp982925 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content40% 
IMG OID638070861 
Producthexapeptide repeat-containing protein acetyltransferase 
Protein accessionYP_677482 
Protein GI110637275 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.207251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0554952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT TTTATAGATG CCGTTTTTTT TTATTTAACA ACAAGGTTAA GAACCGTGGC 
AGGGGAAATA AAGTAGTAAC GAACAGCGCA TCTGCAAAAG CGTGTACAAT ACTTTTTAAC
GGGAATAACA ATACCGTTAT TTTAGGGGAA AGCGCTTCGT TGAGAGGATG CCTGATAATT
ATGAGTGGTG ATGACCATGT TCTGGAGATC GGGGCGCACA CAAGTATTTA TAAGTCAAAC
ATCGCATTTG AAGACCATCA TTGCCTGATT AGCATTGGCG ACTATACAAC TATTCAGGAA
AACGGCGGTA TTTCAGCCGT TGAACCTTAC TCTAAGATTA TTATTGGAAA GAGATGCATG
TTTTCCGTAG ACGTAGATAT CCGTAATACC GATTCACATT CCATTATAAA GCTAGATACA
GGCGAACGGA TCAATCCGGG AAAAAATATT TTTATTGATG ATAAGGTTTG GCTTGGCGCT
TATGTGCAGG TATTAAAAGG CGTTTCAATA GGCAACAATA GTATTGTTGG TATCCGGTCT
CTGGTTACAA AAGATATACC TTCCCATGCA TTGGCGGTAG GTGTACCTGC CAAAGTTATT
AAAACCAATG TTGATTGGCG CGAAGAACGC ATATGA
 
Protein sequence
MNLFYRCRFF LFNNKVKNRG RGNKVVTNSA SAKACTILFN GNNNTVILGE SASLRGCLII 
MSGDDHVLEI GAHTSIYKSN IAFEDHHCLI SIGDYTTIQE NGGISAVEPY SKIIIGKRCM
FSVDVDIRNT DSHSIIKLDT GERINPGKNI FIDDKVWLGA YVQVLKGVSI GNNSIVGIRS
LVTKDIPSHA LAVGVPAKVI KTNVDWREER I