Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0826 |
Symbol | |
ID | 4185966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 929844 |
End bp | 930812 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638070831 |
Product | permease |
Protein accession | YP_677452 |
Protein GI | 110637245 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.668966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATAAAC TACTTTCAAG AATCATTGAA ACGTCTGTAA TAAACAGAAG GCGTGAATCA AAAGAACAGT ATTCTTCTTT TGAAAAGGCT AAAGAGTTTC GTCTTCTTAA AATAGATCTT GGCAGAGTGG TTAAAGATAT TATACTTATT TCATTAGGTA TTATGTCTGC GGCCATCGGG TTGAAAAGTT TTCTTCTTCC AGCTAAATTT ATAGATGGAG GTGCAACCGG TATTGCACTG TTATTATCCG AACTTACAAA GATAGAACTG GCAAGCCTGC TGATTCTGGT AAACATTCCA TTTGTTGTTT TAGGGTATCA TGTGATCAGC AAAAAATTTG CAATTAAAAC CGGCATTGCC ATTGCTGTGC TGGCCATTGT TACGCATTTA TTTTCTTTCC CTGAGATTAC GCACGACAAA TTACTGGTAA GTATTTTTGG TGGCTTTTTC TTAGGTGCCG GTATCGGTTT CTCTGTACGC GGAGGTGCTG TTATTGATGG AACAGAAGTA CTGGCAATTT ATGTAAGCCG CAAATTTGGC GTTACCATGG GCGATGTAAT CATTGGTTTT AATGTATTGA TTTTTTCAGT AGCAGCGTAT ACACTTACCA TTGAAACAGC TTTATATTCT ATGATCACGT ATTTAGCAGC GTCCAAAACC ATTGACTTTG TTGTTGAAGG TATTGATGAA TACATTGGCA TTACGGTTAT TTCATCGCAC AGCGAAGAAA TACGGGAAAT GATTACAACA AACATGCACA AAGGTGTTAC GGTATACAAG GGCAAACGCG GATTTGGAAA ACATGGCCAT GTAGATGATC TGGATATTAT TTATACCATC ATAACCCGTT TGGAGATAAG TAAAATAAAT ACCGAAATTG AAAAAATTGA TCCGAATGCA TTTGTTGTCA TGACAAGTGT AAAAGATACC CGCGGCGGCA TGGTTAAGAA AAGACGCCTG AAACATTAA
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Protein sequence | MNKLLSRIIE TSVINRRRES KEQYSSFEKA KEFRLLKIDL GRVVKDIILI SLGIMSAAIG LKSFLLPAKF IDGGATGIAL LLSELTKIEL ASLLILVNIP FVVLGYHVIS KKFAIKTGIA IAVLAIVTHL FSFPEITHDK LLVSIFGGFF LGAGIGFSVR GGAVIDGTEV LAIYVSRKFG VTMGDVIIGF NVLIFSVAAY TLTIETALYS MITYLAASKT IDFVVEGIDE YIGITVISSH SEEIREMITT NMHKGVTVYK GKRGFGKHGH VDDLDIIYTI ITRLEISKIN TEIEKIDPNA FVVMTSVKDT RGGMVKKRRL KH
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