Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0815 |
Symbol | |
ID | 4185956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 919186 |
End bp | 920214 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638070821 |
Product | hypothetical protein |
Protein accession | YP_677442 |
Protein GI | 110637235 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00019991 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0541314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGATT TTACTGAAAT AACGCTTGAG TTTATATACA TCCATAAAGT TGGAAACAAG CTTAGGGATG AAGGAATCGA AGTATCCGAT AAAAAGCTAA GTTTAGGAAA CGAAGACACA AAAAAATACT TGTTAAGGTA TTTTCTTTCT CCATTCAATA ATAATGAAGT TTATAATTTT CATTATCCGA CAGACCTTAA TCTTAACGAT ACCTACGCTT TTGCTAAAAG GATTTTTGCA AATCCAGAAA ATTTCTATGA ATTATCAATA GATGTTTCAA AGCATTTATA TGAAAAATCT TCTCACCCCA AAATAAACGG AGGAGAGTTT TGTATTTGTT ATTTTAAAGA TTGTTTATTT GAGGGGCAAC AAACTGATGC AATAGGCTTA TTTAAGTCTG AAAAAAAGGA CGTTTTTTTA AAACTCACTT CTTCAAAAAT CGCACATGAA AGTGGAGTTA ATATTGATAA ATTAGACAAA GGATGTTTAA TCTTCAATTT AGAAGAAAAA AACGGCTATA AAGTATGTGT AGTGGATTCA AATAAATCAA ACGACACACA ATATTGGAAA GATGAATTTT TAAGTATAAA ACCTGCTAGT GACAATTATC ATTTTACTAA AGATTTTCTT TCCATAACTA AGAACTTTAT TACAAAACAA ATTCCTGAAG ACTTTGAGGT ATCTAAAGCA GACCAAATAG ACTTCTTAAA CCGTTCAGTC GATTATTTCA AAAAACATGA CACTTTTGAT AAGCAAGAAT TTGAATCAGA GGTTTTTGCA GACAGCAATG TTATTAAATC ATTTCGCAAA TTTGACCAAA TATATAGACA AGAAAACGAA GTAGAGCTTT CAGACAATTT TGAAATATCT GCTCAAGCAG TCAAAAAGCA AGCGAGAGTT TTCAAAAATA TTTTAAAGCT CGACAAAAAC TTTCACATAT ACATTCATGG AAATAGAGAA CTAATAGAAC AAGGAATTGA CGAAAAAGGA CGTAAATATT ATAAAATATA TTACGAAAAT GAAACTTAA
|
Protein sequence | MIDFTEITLE FIYIHKVGNK LRDEGIEVSD KKLSLGNEDT KKYLLRYFLS PFNNNEVYNF HYPTDLNLND TYAFAKRIFA NPENFYELSI DVSKHLYEKS SHPKINGGEF CICYFKDCLF EGQQTDAIGL FKSEKKDVFL KLTSSKIAHE SGVNIDKLDK GCLIFNLEEK NGYKVCVVDS NKSNDTQYWK DEFLSIKPAS DNYHFTKDFL SITKNFITKQ IPEDFEVSKA DQIDFLNRSV DYFKKHDTFD KQEFESEVFA DSNVIKSFRK FDQIYRQENE VELSDNFEIS AQAVKKQARV FKNILKLDKN FHIYIHGNRE LIEQGIDEKG RKYYKIYYEN ET
|
| |