Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0801 |
Symbol | |
ID | 4183975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 903686 |
End bp | 904879 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638070807 |
Product | a-amylase, glycoside hydrolase family 57 protein |
Protein accession | YP_677428 |
Protein GI | 110637221 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00227308 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGTTCGG TTACGCTTTG TTTTCAGGTA CATCAACCTT TCAGGATCAA TCCATACACT TTTTTTGATA TCGGGAAAAA TCATTCCTAC GAAGACGCCG CACATAATAA ATTAGTGGTT GACCGCGTGG CCGACCTCTG TTATCTGCCA ACCAATAAGA TCCTTCTTCA ACAGATCAAA AAATACAAAG GCTTGTTTCG TGTCGCTTTT TCCATCAGCG GTACAACGAT TGAACAATTC AAGCTATACC GGCCCGATGT TATTGATTCA TTTATAGCAT TGGCGAAGAC CGACTGTGTA GAGTTTCTTG CCGAAACCTA TTACCACAGC TTAAGCAGTA TTTTTTCAAA GGAAGAATTT TTAATTCAGG TTGATACACA CCGCAAATTA ATACGTTCGA CATTTGGTTA TCAGACAGAA GTATTCCGCA ATACCGAACT GATCCACAAC AACGACATTG CCGCAACTAT AAAAGAACTG GGCTTAAAAG GCATGATTAC CGAAGGTGTA CAGAAATTGC TGGGCACCAT GAGTACTAAT AAAGTGTATA GTCCGGCGCA TACATCCTTC CCTGTTATTC TGCGCAACTG TAAATTATCC GATGATCTTG CCTTTCGTTT TTCTGATAAA AACTGGAAGG GGTATCCTTT GACAGTTGAA AAATATACCT CCTGGATCAA AAAGAGCCTC AAAAAACATG AAAATGCGAC TATTTATGTC GACTATGAGA CATTTGGTGA GCATCAGAAG AAGAATAGCG GTATCTTTAC GTTTCTGCGC AAACTGCCCG GCATGCTGAT TGATACACAT GGTATTGATT TCATGACCCC TTCTGAGGTG ATTGACAACC TGGAAATTCA TGATGTGTAT GATGCACATG AAACAATCTC CTGGGCGGAT ATTGAAAAAA ATCTTTCTGC CTGGTATCAG AACAGCATGC AAAAAGAAGC GCTGGAAAAA ATATACAGCC TGGAACCGCT GATCCGGAAA ATGCAAATCA GAAGACATAC CGATAAATGG TCGAAACTTC AGACATCGGA TCACTTCTAT TACATGAGCA CCAAAGGCTA CAGCGATGGC GAAGTACATC AATACTTCAG TCCGTTTGCA AGTCCGCATG ACGCCTACAT CCATTACATG AATGTGGTTG CAGACTTTGA ACTGGAGATC AGGAAGAAGA AACTGTTTAA ATAA
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Protein sequence | MRSVTLCFQV HQPFRINPYT FFDIGKNHSY EDAAHNKLVV DRVADLCYLP TNKILLQQIK KYKGLFRVAF SISGTTIEQF KLYRPDVIDS FIALAKTDCV EFLAETYYHS LSSIFSKEEF LIQVDTHRKL IRSTFGYQTE VFRNTELIHN NDIAATIKEL GLKGMITEGV QKLLGTMSTN KVYSPAHTSF PVILRNCKLS DDLAFRFSDK NWKGYPLTVE KYTSWIKKSL KKHENATIYV DYETFGEHQK KNSGIFTFLR KLPGMLIDTH GIDFMTPSEV IDNLEIHDVY DAHETISWAD IEKNLSAWYQ NSMQKEALEK IYSLEPLIRK MQIRRHTDKW SKLQTSDHFY YMSTKGYSDG EVHQYFSPFA SPHDAYIHYM NVVADFELEI RKKKLFK
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