Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0800 |
Symbol | |
ID | 4183974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 901569 |
End bp | 903437 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638070806 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_677427 |
Protein GI | 110637220 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00285677 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACATCC TTTCCATTGA CAATCTTTCT AAAGCTTTCA GCGACAAAAA ACTTATTGAC GGTATTACGC TGGGCTTAAG TAAAGGTGAA AAAGTTGCTA TCGTTGGCAG AAACGGCGCC GGTAAATCAA CCCTGCTTAA AATCGTGATG GGGCTTGAAC AGGCAGACGC CGGTGTTATT GCTATTCACA AAAGTGCTAC CGTAGGATAT CTGGAACAGG ACCCGATTTT ACCTGCGGGT AAAAAAATCA TAGAAGTAGC ACTTGAAAGC CGCAAGGATA TCTGCACAGC GATCATGCTG TACGAAGAAT CTATGGTAAC GCTTGACAGC GATGATATGG AAAAAGCCAT CACGATGATG GATGCGTTGC AGGCCTGGGA GTTTGAAGAC AAAGCGAAAC GTATTCTTTC CAAACTCGGT TTGCAGGATG CAAATCTTGA AGTTCAGAAT CTTTCGGGCG GCCAGCAGCG TCGCGTCGCG CTTGCACGTG TCTTGCTGCA GGAACCGGAT GTATTGCTGA TGGATGAACC GACCAACCAC CTGGATCTGG ACATGATCGA ATGGCTGGAA GAATTATTAA AAGCTTCTCA ACAGACATTA TTGTTTATTA CCCACGACAG GTATTTTCTG GATGAAGTTG CCAATGGTAT TCTTGAACTG GAAGGCGGTA AAATTCAGAT GTACCGCACC AAGTATCCGG AATATCTAGA ACGCAAGGCT GAAGAAGAAG CAATCCGCAA CGCTTCGCTT GAAAAAGTAA CGAATACCTT ACGCAAAGAA GCCGAATGGA TGCGCCGTCA GCCAAAGGCA CGCGGTACAA AAGCAAAATA CCGGATCGAA GCATTTCATT CTATGGAAGG CAATAGAGAT CAGTTGAAAG AAGCCGGACA AGGCGATGTG CAGCTCGATT TCAGCAGCCG ACGGATGGGA AATAAAATTC TTGAACTGCA TCATGTAAAT AAAGCGTTTG GTGAGAAAAA AATTCTTACA GACTTCAATT ATATTTTCAG AAAAAACGAA AAACTGGGTA TCATCGGAAA GAATGGCAGC GGTAAAACTA CCTTGTTACA GCTGATCAAC CGTGCGATCC AGCCCGATTC CGGAGAAATC ATCACCGGTG AAACCATTCA CCTGGGTTAT TATACACAAA AAGGCTTAAC GTTTAAACCG AGACAAAAAG TTATTGAACT GGTAACCGAG ATCGCGGAAC AGTTTCAGAC GGGTAACGGC GAAGATCTGA GTGCTTCTGC CCTGCTGAAA CGTTTCCTGT TTGAACCATC GCGCCAGTAT GAGTTTATTG AAAAACTAAG CGGCGGTGAG AAAAAGCGTT TGCATTTACT CACGATCCTT GTTCGTCAGC CTAACTTCCT GATTCTCGAT GAGCCGACCA ATGATATGGA TCTTTCTACT TTGAGTGTAC TGGAAGATTA CCTGGAAAAC TATAAAGGCT GTCTGATCAT TGTTTCCCAC GACAGGTATT TCATGGATAA GCTGGTTGAT CACTTACTGG TTTTTGAAGG CGAAGGTGTA ATGCGCGAGT ATCCGGGTAA CTATACCGAC TACCGTTACG AACTGGAAGA AGCCATTGAA ACATCGCGCA AACCCGAAGT AAAGGAAGCA GCGAAAGCAG CCGCGCAAAA GGAATCAAAG AATAACTCCA AACGTTCGTT CAAGGAACAG AAGGAATTTG AAGACCTGGA GAAAGAGATT GAAGCGAGTG AGCAAAAGAA AAATGTTCTG ATCGAAAAAC TTTCATCTCC GGATTCAGGT GCAAATATCA CGCAATGGTC GAAAGAACTG GAAGCACTCG ACAGAGACCT TGAGAATAAG ACATTACGTT GGCTGGAATT GTCTGAGAAG GCAGGATAA
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Protein sequence | MNILSIDNLS KAFSDKKLID GITLGLSKGE KVAIVGRNGA GKSTLLKIVM GLEQADAGVI AIHKSATVGY LEQDPILPAG KKIIEVALES RKDICTAIML YEESMVTLDS DDMEKAITMM DALQAWEFED KAKRILSKLG LQDANLEVQN LSGGQQRRVA LARVLLQEPD VLLMDEPTNH LDLDMIEWLE ELLKASQQTL LFITHDRYFL DEVANGILEL EGGKIQMYRT KYPEYLERKA EEEAIRNASL EKVTNTLRKE AEWMRRQPKA RGTKAKYRIE AFHSMEGNRD QLKEAGQGDV QLDFSSRRMG NKILELHHVN KAFGEKKILT DFNYIFRKNE KLGIIGKNGS GKTTLLQLIN RAIQPDSGEI ITGETIHLGY YTQKGLTFKP RQKVIELVTE IAEQFQTGNG EDLSASALLK RFLFEPSRQY EFIEKLSGGE KKRLHLLTIL VRQPNFLILD EPTNDMDLST LSVLEDYLEN YKGCLIIVSH DRYFMDKLVD HLLVFEGEGV MREYPGNYTD YRYELEEAIE TSRKPEVKEA AKAAAQKESK NNSKRSFKEQ KEFEDLEKEI EASEQKKNVL IEKLSSPDSG ANITQWSKEL EALDRDLENK TLRWLELSEK AG
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