| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0741 |
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| Symbol | lysS |
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| ID | 4185685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 835405 |
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| End bp | 837132 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638070747 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_677368 |
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| Protein GI | 110637161 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGA GTGAACAAGA ACTGGTACGC CGCCAGGAAC GTGAAGAGTT ATTAAAAATG
GGTATTGAAC CATACCCTGC AGAACTTTTC CCTGTAAATG TTTCAACAAA AGATATTCAT
CAGAATTACG AAAAGCGAAA GACAGATTAT AAAAATATTT CTATCGCTGG CCGTGTGATG
AGCCGCCGTA TTATGGGTAA TGCCTCTTTC GTTGAGATTC AGGATGCAAG CGGTAGAATC
CAGGCATACT TCAGAAGAGA TGATCTTTGT CCGGATGAAG ACAAAACACA ATACAACACC
GTATTTAAAA AGCTTGTCGG TATCGGTGAT ATTATTGGTA TTTACGGATA TGTGTTTACA
ACACAAACCG GAGAGATCAC GATTCATGTT ACTTCATTTA AAATTTTAAC AAAAGCACTT
CGTCCGTTGC CCATGCCAAA AGAGGCGGTA GATGAGAACG GAGAGAAAAA AATATTTGAT
GCATTCACCG ATCCTGAACA GCGTTACCGC ATGCGTTATG TGGATCTGAT TGTGAACCCG
CATGTGCGCG ATGCTTTTAT CAAACGTACA CGTCTGGTAA ATACCATGCG TGAGTACCTG
AATAACAAAG GATATTTAGA AGTGGAAACG CCGATCTTGC AGCCCTTGTA TGGCGGTGCT
GCTGCGCGTC CGTTCAAGAC ACACCACAAT ACATTAGATA TGCCTTTGTA TTTGCGTATC
GCAAATGAGT TATATCTGAA ACGGTTGATC GTTGGCGGAT TTGATGGAGT ATATGAATTC
TCTAAAGATT TCCGTAACGA AGGTATGTCC CGTTTCCACA ACCCGGAATT CACTCAGGTA
GAATTGTATG TTGCATACAA GGATTACTAC TGGATGATGG ATCTGGTTGA AGAGATGGTT
GAAAAAGTTG CTGTTGCCTT ACACGGTACT ACAGAGGTAC AGGTTGGTCC GCATACGATC
AGCTTCCAGC GCCCCTGGAA ACGTTTCACT ATGTTTGAAG CAATCGAACA TTATACAGGT
ATTAACATTG GTGAAATGGA TGAAGCACAA TTACGTGCAA CATGTAAATC ATTAAATGTG
GATGTAGATG ATTCAATGGG TAAAGGTAAA CTCATTGATG AGATCTTTGG CGCAAAATGC
GAACCATTAT TGATCCAGCC TACATTCATT ACAGACTATC CGGTTGAAAT GTCGCCGTTA
GCGAAGAAAC ACAGGGACAA GCCAGGTTTG GTTGAACGTT TTGAAGCCAT CTGTAATGGT
AAAGAAATCT GCAATTCATT CTCTGAACTG AATGACCCGA TTGATCAGCG TCAGCGTTTT
GAAGAACAGC TGGAGCTTGG CAAAAGAGGT GACAGCGAGA GTATGGTACT GGATGAAGAT
TTTCTTCGTG CACTTGAATA CGGAATGCCG CCTACAGCAG GCCTTGGTAT TGGGATTGAC
CGGTTAGCGA TGGTTATGAC TAATTCAGCT TCGATACAGG ATGTATTATT CTTCCCGCAG
ATGCGTCCGG AAGTTGGTAC ACAGGGAGCA TCTTCCAATG GTTTCCAGGG CATAGAGATC
CGCGGGGAAC TTGTTCCGTT GATTGAGAAA TTAGGTATCT CTACGGTAGA ACAATTAAAA
GCAGCAAACC CGAATAAATT ATTTAATGAT TTGTGCGGCT TACGTAAAAA AATGAAGCTT
GAAATCGCAA ACCCTACGGC TGATGAGGTG AAGGGATGGC AGGCGTGA
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| Protein sequence | MQLSEQELVR RQEREELLKM GIEPYPAELF PVNVSTKDIH QNYEKRKTDY KNISIAGRVM
SRRIMGNASF VEIQDASGRI QAYFRRDDLC PDEDKTQYNT VFKKLVGIGD IIGIYGYVFT
TQTGEITIHV TSFKILTKAL RPLPMPKEAV DENGEKKIFD AFTDPEQRYR MRYVDLIVNP
HVRDAFIKRT RLVNTMREYL NNKGYLEVET PILQPLYGGA AARPFKTHHN TLDMPLYLRI
ANELYLKRLI VGGFDGVYEF SKDFRNEGMS RFHNPEFTQV ELYVAYKDYY WMMDLVEEMV
EKVAVALHGT TEVQVGPHTI SFQRPWKRFT MFEAIEHYTG INIGEMDEAQ LRATCKSLNV
DVDDSMGKGK LIDEIFGAKC EPLLIQPTFI TDYPVEMSPL AKKHRDKPGL VERFEAICNG
KEICNSFSEL NDPIDQRQRF EEQLELGKRG DSESMVLDED FLRALEYGMP PTAGLGIGID
RLAMVMTNSA SIQDVLFFPQ MRPEVGTQGA SSNGFQGIEI RGELVPLIEK LGISTVEQLK
AANPNKLFND LCGLRKKMKL EIANPTADEV KGWQA
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