Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0728 |
Symbol | |
ID | 4186026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 826015 |
End bp | 827130 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070734 |
Product | hypothetical protein |
Protein accession | YP_677355 |
Protein GI | 110637148 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.320774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAC GTAGCTTATT TTATTGTGTA TGCCTGTTAT TGTTTATTAC ACACAATAAT TGTGTTGCTC AGGAATTGCA AGCCGGATTT GATAAACAGG AATACATGGA GACATTGAAG ATTAATTACA AGGTGCATAT TGCGCTCGAT AAATGGGCTG CAAATACCAG TGTAGCCGAT CCACAGGATT TCGATTTTGT TTACCGCTCA CCCGTTGTGG CTTTTGATAA TATATGGGAT CTCTGGAAAC ATAAAAATAA ATCCGTTGCA TTGATATCGG TACAAGGCAG TATTCAGACC GAAGCAAGTT TTCTGGCAAA TCTGTATGCC GCTATGATTC CGGCCAAAGG CGAGCTGCAG CTGGATAAAG ATTTTAAATT TACCTATCAG CTGGCCGATA ATCCGCATGC AGCTGTGCAT GTTGGCTGGT TTGTGGCAAT GGCTTATTTA TCAAAAACAG TTGTATCCAA AATAGATTCC TGTTATAACG CCGGTATCAA AGATTTTATA TTAACAGGGC ATAGTCAGGG TGGCGGAATT ACATTTTTAC TTAATTCCTA TCTGGAAAAT TTAAAAATGC AAGGCCGGCT TCCTGCAGAT ATCCGTTTTA AAACCTATTG CAGTGCTGGT CCTAAGCCAG GTAACTTATT TTATGCCTAC GAATATGAAC ATATGACAGC AGGCGGCTGG GCATATAATG TTGTGAATAC TGCAGACTGG GTTCCGGATG TTCCGTTTTC TGTACAGACA GTAACGGATT TTACCGCCGT TAATCCGTTT CACGGCGCAA AAAAAGCAAT CAGAAAACAA CGTTTCCCGG CAAACCTTGC CTTGAAACAT ATGTACAACA AAATGAGCAA GCCGAGTGAG CGGGCACAGA AAAATTATCA GAAGTATTTA GGCAGAATGG TTTCCAATGC GGTTAAAAAA CAAATTCCGA ATTTTAATGC CCCCGAATAT TATAACAGTA ATTATTATGT GCGAACAGGC AATACAATCG TTTTATTTCC GGATGAAGCG TATTATAAGA TTTACAGCAA TGATCCCGAA GATCCGAATA TCTGGAGACA TCATTTACCG GCACCTTATC TGATGCTTGC AGAAAAATTA AACTGA
|
Protein sequence | MKKRSLFYCV CLLLFITHNN CVAQELQAGF DKQEYMETLK INYKVHIALD KWAANTSVAD PQDFDFVYRS PVVAFDNIWD LWKHKNKSVA LISVQGSIQT EASFLANLYA AMIPAKGELQ LDKDFKFTYQ LADNPHAAVH VGWFVAMAYL SKTVVSKIDS CYNAGIKDFI LTGHSQGGGI TFLLNSYLEN LKMQGRLPAD IRFKTYCSAG PKPGNLFYAY EYEHMTAGGW AYNVVNTADW VPDVPFSVQT VTDFTAVNPF HGAKKAIRKQ RFPANLALKH MYNKMSKPSE RAQKNYQKYL GRMVSNAVKK QIPNFNAPEY YNSNYYVRTG NTIVLFPDEA YYKIYSNDPE DPNIWRHHLP APYLMLAEKL N
|
| |