Gene CHU_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0728 
Symbol 
ID4186026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp826015 
End bp827130 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content40% 
IMG OID638070734 
Producthypothetical protein 
Protein accessionYP_677355 
Protein GI110637148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.320774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GTAGCTTATT TTATTGTGTA TGCCTGTTAT TGTTTATTAC ACACAATAAT 
TGTGTTGCTC AGGAATTGCA AGCCGGATTT GATAAACAGG AATACATGGA GACATTGAAG
ATTAATTACA AGGTGCATAT TGCGCTCGAT AAATGGGCTG CAAATACCAG TGTAGCCGAT
CCACAGGATT TCGATTTTGT TTACCGCTCA CCCGTTGTGG CTTTTGATAA TATATGGGAT
CTCTGGAAAC ATAAAAATAA ATCCGTTGCA TTGATATCGG TACAAGGCAG TATTCAGACC
GAAGCAAGTT TTCTGGCAAA TCTGTATGCC GCTATGATTC CGGCCAAAGG CGAGCTGCAG
CTGGATAAAG ATTTTAAATT TACCTATCAG CTGGCCGATA ATCCGCATGC AGCTGTGCAT
GTTGGCTGGT TTGTGGCAAT GGCTTATTTA TCAAAAACAG TTGTATCCAA AATAGATTCC
TGTTATAACG CCGGTATCAA AGATTTTATA TTAACAGGGC ATAGTCAGGG TGGCGGAATT
ACATTTTTAC TTAATTCCTA TCTGGAAAAT TTAAAAATGC AAGGCCGGCT TCCTGCAGAT
ATCCGTTTTA AAACCTATTG CAGTGCTGGT CCTAAGCCAG GTAACTTATT TTATGCCTAC
GAATATGAAC ATATGACAGC AGGCGGCTGG GCATATAATG TTGTGAATAC TGCAGACTGG
GTTCCGGATG TTCCGTTTTC TGTACAGACA GTAACGGATT TTACCGCCGT TAATCCGTTT
CACGGCGCAA AAAAAGCAAT CAGAAAACAA CGTTTCCCGG CAAACCTTGC CTTGAAACAT
ATGTACAACA AAATGAGCAA GCCGAGTGAG CGGGCACAGA AAAATTATCA GAAGTATTTA
GGCAGAATGG TTTCCAATGC GGTTAAAAAA CAAATTCCGA ATTTTAATGC CCCCGAATAT
TATAACAGTA ATTATTATGT GCGAACAGGC AATACAATCG TTTTATTTCC GGATGAAGCG
TATTATAAGA TTTACAGCAA TGATCCCGAA GATCCGAATA TCTGGAGACA TCATTTACCG
GCACCTTATC TGATGCTTGC AGAAAAATTA AACTGA
 
Protein sequence
MKKRSLFYCV CLLLFITHNN CVAQELQAGF DKQEYMETLK INYKVHIALD KWAANTSVAD 
PQDFDFVYRS PVVAFDNIWD LWKHKNKSVA LISVQGSIQT EASFLANLYA AMIPAKGELQ
LDKDFKFTYQ LADNPHAAVH VGWFVAMAYL SKTVVSKIDS CYNAGIKDFI LTGHSQGGGI
TFLLNSYLEN LKMQGRLPAD IRFKTYCSAG PKPGNLFYAY EYEHMTAGGW AYNVVNTADW
VPDVPFSVQT VTDFTAVNPF HGAKKAIRKQ RFPANLALKH MYNKMSKPSE RAQKNYQKYL
GRMVSNAVKK QIPNFNAPEY YNSNYYVRTG NTIVLFPDEA YYKIYSNDPE DPNIWRHHLP
APYLMLAEKL N