Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0703 |
Symbol | |
ID | 4186478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 800866 |
End bp | 802491 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638070709 |
Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_677330 |
Protein GI | 110637123 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.946245 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGATGA CTATTAAACC GGAAAAAATA AACGAAACCC TGTTGCACTA TGCACCCGGC TCTGCGGAGC GTTCTGCCGT TCAGCAAAAA ATAACTGAAC TTAAAGCTGC TGAAGTAATC ATACCCATGA TCATTAATGG GAAAGAAGTA TTTACCGATC AGCATGTCCG TATAGCACCT CCGCATGAGC ATGCCTATAC ACTGGGTTAT TTCTGCGAAG GAAAAGGGGT ACATGTTTCA AATGCGATCT CGGCAGCGCT GCATGCCAAA CACAGCTGGG CAGTCAAATC ACTGAAAGAA CGGGCAGCAG TATTTCTAAA AGCTGCAGAC CTGATTTCTA CAACCTATCG GGCAGAGATC AATGCCGCTA CCATGCTGGG CCAGTCTAAA AATGTGTACC AGGCTGAAAT TGATTCGGCC TGCGAACTGA TTGATTTTTT CCGTTTGAAT GTGGCTTTTG CGTATGAAAT TGAAACCATC CAGCCATGTT CGCACGAAGG TATCATTAAC AGAATGATCT ACCGTCCGCT CGAAGGATTT ATCTTTGCTT TAACACCCTT CAACTTTACA GCCATTGCAG GCAACCTGCC TGCTGCACCC GCATTAATGG GCAATACGGT AGTATGGAAA CCCGCATACA CACAAATCTA TTCCGCGCGT ATCATTATGA AAGTTTTGAT AGAAGCGGGC TTGCCAAATG GTGTCATTAA TTTAATCTAT ACAGACGGAC CAGTAACCGG GGATATTATT TTTCAGCACC GGCAATTTGC AGGACTTCAC TTTACAGGAA GCACAGCTGT ATTCAAGCAG ATTTCAACAA CCATTCACAA CAACATTGAC CTGTACCAGA ATTTTCCGCG TATTGTTGGC GAAACAGGCG GAAAAGATTT TGTACTGGCA CACGCCTCCT GCGATGTACA GGCTTTATCT GTAGCGCTTG TGCGGGGCGC TTTTGAATAC CAGGGACAAA AATGTTCTGC TGCTTCAAGA GCGTATATTC CAGCTTCCAT CTGGCCTTCG GTTAGGGAAC ATATCGTTCA TATGCTTGAT GAAATTAAAA TGGGAACGGT AGAAGATTTT TCAAATTTCA TAAATGCTGT AATAGACGAA AAAGCATTTG ATAAAATTGT ACGCTACATC GATGCTGCTA AAAAAGATCC GGAAGCAAGT ATCATCGCCG GCGGAAAATA TGATAAATCC ATCGGTTATT TTATTGAGCC TACAATTATA GAAGCCAGCA ATCCGCAATA CGTTACCATG CGCGAAGAGA TTTTCGGCCC GGTACTTACT GTGTATGTAT ATAAAGATTC CGAATGGAAC CAGGTACTGG GTATAGTTGA CACAACTACA CCGTATGCGC TTACCGGAAG TATTTTTGCT GCAGATAGCG CAATCATTGA GGAGGCTAAA AAAGCCTTGT ATTACAGTGC AGGAAATTTA TACATCAATG ATAAACCTAC CGGCGCGGTT GTGAATCAGC AGCCTTTCGG CGGTGCACGC TTATCCGGCA CAAACGACAA AGCTGGCTCT GTTTTAAATT TACTTCGGTG GGTGAGCCCG TTGGTCGTAA AAGAAAATCT TTCGCCGCCG CACGATTATA CCTATGATTT CATGAAGCTG CAATGA
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Protein sequence | MQMTIKPEKI NETLLHYAPG SAERSAVQQK ITELKAAEVI IPMIINGKEV FTDQHVRIAP PHEHAYTLGY FCEGKGVHVS NAISAALHAK HSWAVKSLKE RAAVFLKAAD LISTTYRAEI NAATMLGQSK NVYQAEIDSA CELIDFFRLN VAFAYEIETI QPCSHEGIIN RMIYRPLEGF IFALTPFNFT AIAGNLPAAP ALMGNTVVWK PAYTQIYSAR IIMKVLIEAG LPNGVINLIY TDGPVTGDII FQHRQFAGLH FTGSTAVFKQ ISTTIHNNID LYQNFPRIVG ETGGKDFVLA HASCDVQALS VALVRGAFEY QGQKCSAASR AYIPASIWPS VREHIVHMLD EIKMGTVEDF SNFINAVIDE KAFDKIVRYI DAAKKDPEAS IIAGGKYDKS IGYFIEPTII EASNPQYVTM REEIFGPVLT VYVYKDSEWN QVLGIVDTTT PYALTGSIFA ADSAIIEEAK KALYYSAGNL YINDKPTGAV VNQQPFGGAR LSGTNDKAGS VLNLLRWVSP LVVKENLSPP HDYTYDFMKL Q
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