Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0673 |
Symbol | |
ID | 4184082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 772552 |
End bp | 773580 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070679 |
Product | lipoprotein transmembrane protein |
Protein accession | YP_677300 |
Protein GI | 110637093 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.74924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGT TTTTGCAAAC ACTTTCAACG GCCGGTTTCA ACGGTTTCTT TTTTTGTTTG ATAGGCGTGG TACTGCTTGC ATACCTATTC CCTTCGTGGG GTGCAGAAGG AAGCATATTG CCGCTTTCAG CAATTGCGCA GTATGGTGTT TCAATTATTT TCTTTTTTTA TGGCTTGAAA TTAAGTCCTC AGAAAATGAA AGAGGGTTTA TATAACTGGC GTTTGCATCT GCTTATTCAA TCCTCAACGT TTATAGCCTT TCCTGTTTTG ATTTTAATCC TGCACACCAT CTTTGGTACA GAGTCTGCTA AACTTATCTG GCTGGGTGTA TTCTATGTTG CGGCACTACC GTCCACCGTA TCATCTTCTG TTGTAATGGT TTCTATTGCA GGCGGTAATA TGCCTGCCGC TATATTTAAT GCAAGCGTCT CCAGTATTTT AGGGGTTTTT ATTACGCCCG TCTGGATGAC TTATTTTATG GGTGAGATGT ATGCAGAAAT GGATACAACA ACTGTCATTA TCAAATTGAG TTTTCAGGTA TTGGCACCAG TTATTGTTGG ATTATTTTTG AATAAGTGGT ATGGTCATAT TACCGATAGA TATAAATCTC AGCTGCGGCT CTTTGATCAG GCAATTATTT TACTCATCGT TTTTACTTCA TTCGCTGAAT CCTTTGAAGG GCATATGTTT GCAGATGTAC CAATCACAGA AATTTTAGGT ATTGCCGGCG CTATGATTGT GCTTTTCTTA TTCATGTTTG GCTTCATGTA TTTTTTATCA AATCTCTTAA AACTAAACAG GGAAGACCGG ATTGCCGTAT TGTTCTGCGG TTCTAAAAAA TCTCTGGTCC AGGGTGCCGT AATGGGTAAA GCGTTGTTTC CGGATCCCAT GATGTTAGGG GTCGTGTTAT TGCCATTAAT GCTCTATCAT GCGCTGCAGC TGATTGCAAG CAGTATTATA GCAGAAGCAA TGGGCAATAG AAAATTACAT GAATATGGTG CGGATAAAAT TAAACAGGAT GCTCGCTGA
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Protein sequence | MKQFLQTLST AGFNGFFFCL IGVVLLAYLF PSWGAEGSIL PLSAIAQYGV SIIFFFYGLK LSPQKMKEGL YNWRLHLLIQ SSTFIAFPVL ILILHTIFGT ESAKLIWLGV FYVAALPSTV SSSVVMVSIA GGNMPAAIFN ASVSSILGVF ITPVWMTYFM GEMYAEMDTT TVIIKLSFQV LAPVIVGLFL NKWYGHITDR YKSQLRLFDQ AIILLIVFTS FAESFEGHMF ADVPITEILG IAGAMIVLFL FMFGFMYFLS NLLKLNREDR IAVLFCGSKK SLVQGAVMGK ALFPDPMMLG VVLLPLMLYH ALQLIASSII AEAMGNRKLH EYGADKIKQD AR
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