Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0566 |
Symbol | |
ID | 4184052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 659674 |
End bp | 660111 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638070571 |
Product | hypothetical protein |
Protein accession | YP_677193 |
Protein GI | 110636986 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00681752 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.504746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGAC GAGTCATTCA TACGGATAAC GATAAGCAAA CGATCATCAT CCGTTTCCTT GTTGGCTGTG TATTTTTATC TGAAGGCATT CAAAAAATCT TATTTGCCAA AACACTTGGC AGCGGGCGTT TTGAAACAAT CGGCTTGCCT GCGCCGGAAA TTTTAGGACC GTTTGTAGCT ATGGTTGAAA TCTGCGGTGG ATTTTTACTG CTCATTGGAT TGTTTACCCG ACTGGTATGT GTTCCATTGA TTGTAGTCAT CCTGGCAGCA ATTGCAACAA CTAAGTCGGT TATTTATGTT GAAAAAGGTT TTTGGGAATT GCTTCATAAC AGCAGAACAG ACTGGGCTAT GCTGTTAGGC TGCATGTTCC TTTTCATAAA AGGGAGTGGT TTTTATTCGG TAGATTATAC CTATAATAAA ATAAAAAGCT ACGCTTGA
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Protein sequence | MLRRVIHTDN DKQTIIIRFL VGCVFLSEGI QKILFAKTLG SGRFETIGLP APEILGPFVA MVEICGGFLL LIGLFTRLVC VPLIVVILAA IATTKSVIYV EKGFWELLHN SRTDWAMLLG CMFLFIKGSG FYSVDYTYNK IKSYA
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