Gene CHU_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0564 
Symbol 
ID4184050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp658517 
End bp659041 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content36% 
IMG OID638070569 
Producthypothetical protein 
Protein accessionYP_677191 
Protein GI110636984 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0475935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.512882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGCCA TACAGGCACA GAATTGGTCG CTGGACAAAT CGCATTCAAA ACTAACGTTT 
ACCATTGTTC ACTTAGGAAT TTCTGAACAG GAAGGGAATT TTAAAAATTT CTCTATTACA
CTTACTTCCT CCAAAGAAGA TTTTTCAGAT GCGGTTATTG CACTTACTGC AGACGTTACT
TCAATAGATA CCGACAATAC CACGCGTGAC GAGCACTTAA AGGGCGCTAA TTATTTTGAT
GCTGCTGTTT ATCCATCACT AACTTTCAAA AGTAAATCAT TTACAAAGAC AACCGGAAAT
AAATATAAAT TAACCGGAGA CCTCACGATA AGAAATGTTA CTAAAACGGT TGATCTGGAA
GTTACCTATA TCGGATCAAC GATCAATCAA AAAACACAAA AAAAGGTTGC AGGATTTAAA
CTGACAGGTG TAATAAACCG CATTGATTTT GGTGTAGGAA AATCAAGCAC TACCTTAAGT
GATGATGTAA CAATCACCGC TAATATAGAA GTTATTAAAG ATTAA
 
Protein sequence
MSAIQAQNWS LDKSHSKLTF TIVHLGISEQ EGNFKNFSIT LTSSKEDFSD AVIALTADVT 
SIDTDNTTRD EHLKGANYFD AAVYPSLTFK SKSFTKTTGN KYKLTGDLTI RNVTKTVDLE
VTYIGSTINQ KTQKKVAGFK LTGVINRIDF GVGKSSTTLS DDVTITANIE VIKD