Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_0561 |
Symbol | soxC |
ID | 4184047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 654477 |
End bp | 655721 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638070566 |
Product | sulfite dehydrogenase |
Protein accession | YP_677188 |
Protein GI | 110636981 |
COG category | [R] General function prediction only |
COG ID | [COG2041] Sulfite oxidase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.974393 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGATC ATGCTAAAAA AGAAGATACC GGCTTGAGCC GTCGATCCTT ACTGGCTATG GCTGGTTTGG CAACCGTTGC ATTTGTCCAG ACTTCGCTTG GTAAAACAGT GCAGATGCTG CAGCCGCCGG CAATGTTTTT ATCTGATGAT CCTACTAAAA GCATTGGTGC TCCTCCGGGT TTAGTTGGCA ATCGTTCTGC GTATGAAAAT CCTGTTAAAA AAACATCCGA CACATCTTCC AGAACACCAC TGCAGGATCT GTACGGAACC ATTACTCCTT CTGATCTGCA CTTTGAACGG CACCACGCAG GTATGCCGGA TATCAATCCG GAAGCATATG AATTAATCAT TCATGGAATG GTTGACAAAC CTAAGAAATT TTCGCTGCAG GATCTGAAGC GGTTTCCATC CGTATCACGC ATTTGCTTTC TGGAATGTTC GGGGAACTAC CGCACAGGAA AGGAAACGAT GACCGCTCAG GAGATCTGCG GCATGACCAG CCAAAGCGAA TGGACAGGAG TAATGCTTTC TACGCTGTTG CGTGAAGTCG GTATTCGGGA TACGGCACAA TGGCTGCTTG CAGAAGGCGG GGATGCTGCT GTAATGACGC GCAGCATTCC GGTAACAAAA GCATTGGACG ATGCCATGAT TGTGTACGCA CAGAATGGAG AAGCCTTACG TCCGCAGCAG GGATATCCGG TGCGCCTGTT ATTGCCGGGC TGGGAAGGGA ATACAAATAT AAAATGGCTT CGGCGCATTG AAGTTTCGGA CGCTCCGTTT ATGACACGCG AAGAAACATC TAAATATACC GAAACAATAA AAGGCGGATT TTACCGGCAG TTCAGTTTCG ATATGGATGC ACGTTCCATC ATCACATTTC CTTCGTATCC CAGACAGGTC GAAAAAGGCT GGATCGAAAT TCAGGGAATT GCGTGGACAG GAAGAGGTAA GGTATTGCGG GTAGATATAA CAACAGATGC AGGTAAAACA TGGCTGCCTG CGCAGCTGCA GGAACCTGTT CTGGATAAGG CACACGTGCG GTTCCGTTTT TTATGGAACT GGAACGGAGA TGAAACAGAA ATTGCAAGCC GTGTAACCGA TGAAACAGGA TATCAGCAGC CATTCTTAAA ACAGTTGCTG GAAGCAAGAG GAGGCGTGTC TGGTGGATAC CATTTTAATC CGGTAACATT CTGGCGGGTA AAAAAAGATG GTTTAGTGGT ACTCAATCCG GATGCCATGA AATAG
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Protein sequence | MKDHAKKEDT GLSRRSLLAM AGLATVAFVQ TSLGKTVQML QPPAMFLSDD PTKSIGAPPG LVGNRSAYEN PVKKTSDTSS RTPLQDLYGT ITPSDLHFER HHAGMPDINP EAYELIIHGM VDKPKKFSLQ DLKRFPSVSR ICFLECSGNY RTGKETMTAQ EICGMTSQSE WTGVMLSTLL REVGIRDTAQ WLLAEGGDAA VMTRSIPVTK ALDDAMIVYA QNGEALRPQQ GYPVRLLLPG WEGNTNIKWL RRIEVSDAPF MTREETSKYT ETIKGGFYRQ FSFDMDARSI ITFPSYPRQV EKGWIEIQGI AWTGRGKVLR VDITTDAGKT WLPAQLQEPV LDKAHVRFRF LWNWNGDETE IASRVTDETG YQQPFLKQLL EARGGVSGGY HFNPVTFWRV KKDGLVVLNP DAMK
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