Gene CHU_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_0561 
SymbolsoxC 
ID4184047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp654477 
End bp655721 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content47% 
IMG OID638070566 
Productsulfite dehydrogenase 
Protein accessionYP_677188 
Protein GI110636981 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.974393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGATC ATGCTAAAAA AGAAGATACC GGCTTGAGCC GTCGATCCTT ACTGGCTATG 
GCTGGTTTGG CAACCGTTGC ATTTGTCCAG ACTTCGCTTG GTAAAACAGT GCAGATGCTG
CAGCCGCCGG CAATGTTTTT ATCTGATGAT CCTACTAAAA GCATTGGTGC TCCTCCGGGT
TTAGTTGGCA ATCGTTCTGC GTATGAAAAT CCTGTTAAAA AAACATCCGA CACATCTTCC
AGAACACCAC TGCAGGATCT GTACGGAACC ATTACTCCTT CTGATCTGCA CTTTGAACGG
CACCACGCAG GTATGCCGGA TATCAATCCG GAAGCATATG AATTAATCAT TCATGGAATG
GTTGACAAAC CTAAGAAATT TTCGCTGCAG GATCTGAAGC GGTTTCCATC CGTATCACGC
ATTTGCTTTC TGGAATGTTC GGGGAACTAC CGCACAGGAA AGGAAACGAT GACCGCTCAG
GAGATCTGCG GCATGACCAG CCAAAGCGAA TGGACAGGAG TAATGCTTTC TACGCTGTTG
CGTGAAGTCG GTATTCGGGA TACGGCACAA TGGCTGCTTG CAGAAGGCGG GGATGCTGCT
GTAATGACGC GCAGCATTCC GGTAACAAAA GCATTGGACG ATGCCATGAT TGTGTACGCA
CAGAATGGAG AAGCCTTACG TCCGCAGCAG GGATATCCGG TGCGCCTGTT ATTGCCGGGC
TGGGAAGGGA ATACAAATAT AAAATGGCTT CGGCGCATTG AAGTTTCGGA CGCTCCGTTT
ATGACACGCG AAGAAACATC TAAATATACC GAAACAATAA AAGGCGGATT TTACCGGCAG
TTCAGTTTCG ATATGGATGC ACGTTCCATC ATCACATTTC CTTCGTATCC CAGACAGGTC
GAAAAAGGCT GGATCGAAAT TCAGGGAATT GCGTGGACAG GAAGAGGTAA GGTATTGCGG
GTAGATATAA CAACAGATGC AGGTAAAACA TGGCTGCCTG CGCAGCTGCA GGAACCTGTT
CTGGATAAGG CACACGTGCG GTTCCGTTTT TTATGGAACT GGAACGGAGA TGAAACAGAA
ATTGCAAGCC GTGTAACCGA TGAAACAGGA TATCAGCAGC CATTCTTAAA ACAGTTGCTG
GAAGCAAGAG GAGGCGTGTC TGGTGGATAC CATTTTAATC CGGTAACATT CTGGCGGGTA
AAAAAAGATG GTTTAGTGGT ACTCAATCCG GATGCCATGA AATAG
 
Protein sequence
MKDHAKKEDT GLSRRSLLAM AGLATVAFVQ TSLGKTVQML QPPAMFLSDD PTKSIGAPPG 
LVGNRSAYEN PVKKTSDTSS RTPLQDLYGT ITPSDLHFER HHAGMPDINP EAYELIIHGM
VDKPKKFSLQ DLKRFPSVSR ICFLECSGNY RTGKETMTAQ EICGMTSQSE WTGVMLSTLL
REVGIRDTAQ WLLAEGGDAA VMTRSIPVTK ALDDAMIVYA QNGEALRPQQ GYPVRLLLPG
WEGNTNIKWL RRIEVSDAPF MTREETSKYT ETIKGGFYRQ FSFDMDARSI ITFPSYPRQV
EKGWIEIQGI AWTGRGKVLR VDITTDAGKT WLPAQLQEPV LDKAHVRFRF LWNWNGDETE
IASRVTDETG YQQPFLKQLL EARGGVSGGY HFNPVTFWRV KKDGLVVLNP DAMK