| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0463 |
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| Symbol | yliA |
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| ID | 4186330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 544823 |
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| End bp | 546652 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638070470 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_677092 |
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| Protein GI | 110636885 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAG AGGGTGAAAA AGTAGAACAG GATTTCCTAC TAAAAGTAAG TAATCTCAGC
ACGCATTTCC GTACTGAAAG AGGAATTGTT AAAGCTGTAG ACAATGTCAG TTTTACACTT
AAGCGTGGTG AAACCATTGG TATCGTTGGC GAATCCGGCT CCGGTAAATC TGTTACTGCA
TTATCTCTGA TGCAATTGAT CCCGAACCCA CCGGGTAAAA TTGCAAATGG TACGATCGAA
TTCAATCATC CGCAAAAAGG TATTATTGAT CTGGTGACAC TGGATAAACA GGAAATGCAG
CAAGAACGGG GCAACTCGAT TTCCATGATT TTCCAGGAAC CGATGACTTC ACTGAACCCG
GTATTTACCT GCGGGGATCA GGTTATGGAA GCCATACAAT TGCACCAGAA CGTATCCAAA
CAGGAAGCAA AAAAACGAAC CATCGAACTT TTCCAGAAAG TGGAACTGCC CCGACCGGAA
GCTATTTTTG ATTCTTACCC GCACCAGATT TCAGGCGGAC AGAAACAACG TGTCATGATT
GCCATGGCCA TGTCCTGCAA TCCTTCCGTG TTAATTGCTG ATGAACCTAC AACGGCACTT
GATGTTACTG TTCAGGCACG TATCCTAGAA TTGATGCAGC AGTTACGGGA TGAAAACAAT
ATGGGCATTT TATTTATCAC GCATGATTTG GGCGTGGTAG CTGAGATTGC CGATAAAGTA
ATTGTTATGT ACCAGGGCAA AATTGTAGAG CAGGGCACTG TATATGAAAT CTTCTCTAAC
CCGCAGCACC CGTATACAAA AGGCTTGCTG GCATGCCGGC CTAAACTGGA TCTGCATCTG
AAGGTATTAC CTGTGGTGTC TGATTTTATG GAAATAGACG TGCATGGGAA ATTCCTTGAA
AAAGAACGTA AGTTTTCTTC CATTGGTGAA GCCATTTTAT TCAACTACGT TTCAGACGAA
GATATTATAG ACCGGAACAA GGCCTTAGCC GTGCTTGAAC CGCAATTAAA AATTAAAAAT
CTTAAAACGT GGTTCCCGAT CAAAAAAGGT TTTTTAAATA AAACCGTTGA TTATGTAAAA
GCTGTAGATG ATGTTTCCTT CAATGTATTT CCGGGAGAAA CGATTGGCCT GGTTGGAGAA
TCCGGTTGCG GTAAAACCAC CCTGGGGCGC AGTATCCTGC GTTTGATCGA TCCTTCAGAA
GGTTCAATTG AATTTGAAGG CGTAAACATT TTAGATTTAA ACGAAAAAGA ATTACGAAAC
CTGCGGAAAG ATATCCAGAT CATTTTCCAG GATCCGTACT CTTCCTTAAA CCCACGTATG
ACCATCGGTG AAGCCATTAT TGAACCGATG CGTATCAATA ACATTTTAGA CACGGATTTT
GCCCGTAAAA AACGTGCTAT TGAGTTATTG GAACGTGTAA ACCTGAATCG TAAACAGTTC
AACCGTTATC CGCATGAATT TTCCGGCGGT CAGCGTCAGC GTATCTGTAT TGCACGCGCA
CTGGCCTTAA ATCCGAAATT CATTATATGC GATGAATCTG TATCCGCGCT TGATGTGTCC
GTTCAGGCAC AAGTGCTAAA TTTATTGAAC GAATTAAAAG AAGAATTCAA TTTTACCTAT
ATCTTTATAT CACATGATCT TTCGGTGGTC AAATTTATGT CAGACCGGAT CATTGTAATG
AATAAAGGTA AGATTGAAGA AATGGGGTAT GCTGAAGATA TTTATCATAA CCCACAAACC
GAATATACTA AACGACTTAT TCATTCTATA CCTAAAGGGA ACCTGGAAGA TATTCTTCGG
GCCCAGTTAA AACGAAAGAA CAAAGTCTGA
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| Protein sequence | MQAEGEKVEQ DFLLKVSNLS THFRTERGIV KAVDNVSFTL KRGETIGIVG ESGSGKSVTA
LSLMQLIPNP PGKIANGTIE FNHPQKGIID LVTLDKQEMQ QERGNSISMI FQEPMTSLNP
VFTCGDQVME AIQLHQNVSK QEAKKRTIEL FQKVELPRPE AIFDSYPHQI SGGQKQRVMI
AMAMSCNPSV LIADEPTTAL DVTVQARILE LMQQLRDENN MGILFITHDL GVVAEIADKV
IVMYQGKIVE QGTVYEIFSN PQHPYTKGLL ACRPKLDLHL KVLPVVSDFM EIDVHGKFLE
KERKFSSIGE AILFNYVSDE DIIDRNKALA VLEPQLKIKN LKTWFPIKKG FLNKTVDYVK
AVDDVSFNVF PGETIGLVGE SGCGKTTLGR SILRLIDPSE GSIEFEGVNI LDLNEKELRN
LRKDIQIIFQ DPYSSLNPRM TIGEAIIEPM RINNILDTDF ARKKRAIELL ERVNLNRKQF
NRYPHEFSGG QRQRICIARA LALNPKFIIC DESVSALDVS VQAQVLNLLN ELKEEFNFTY
IFISHDLSVV KFMSDRIIVM NKGKIEEMGY AEDIYHNPQT EYTKRLIHSI PKGNLEDILR
AQLKRKNKV
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