| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0427 |
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| Symbol | |
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| ID | 4185432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 498043 |
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| End bp | 505374 |
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| Gene Length | 7332 bp |
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| Protein Length | 2443 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070434 |
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| Product | mannosidase-related protein |
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| Protein accession | YP_677056 |
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| Protein GI | 110636849 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.37928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATC TTTTCCTTTT GCCTTTATTG TTATTGACCC ATTTAGTTTT TGCCCAAGCC
CCGGCAAACG ATGAATGTAT TCAGGCAATA ACCCTTACTC CCTCAGCTAC GCGAACCTAT
TTGCCCGCAG ACCTGGCTTC CGCTACACAG TCGTCTCCCA ATGGCTGCGT AACCTATATG
GATGTGTTTT ATAAATATGT AGCAACCTCA GCCATCAACG TTATTTCTGT TACTCCGGGA
TCAGGATTAG ATATAAGCCT GAGTTTATAT TCAAGCTGCA GTGCTGCCAC TCCCATAACA
TGTTCAAATG CATATTCCTA TAACGGATCC GAAACAATAA TTGCTACCAA TCAGGTTATA
GGTAATACCT ATTATGTTAA AGTTGGAAGT GCAAATTCTA CAAAACCAAA TAATACAACA
TTTTCTATCT GTGTAGTTAT TCCTCCTGTA AATACTACCT GCGATGGAGC TATAAATATT
ACACCTTCAA CTACTGCGTG TAGCTATACG AACGGAAATC TGACAGAGGC TTTATACTCA
AATTATTCAT GTGGTATGAA TCAAAGTGTG TTTTATAAAT TCACGGCGAC CTCTCCAAGT
ACCGAAATCA CGTTGACCAC AAGCGCTACA TTTGATGTAT CGGCTGCGTT GTATTCAAGC
TGTAATGCAT CTTCCCTGTT ATACTGCATC AACTTGAATC CTGGCTCCGG AGAACGAATT
TCTGCTGCTA ACTTAACGGT AGGTAATACC TATTATGTGC AGGTTGGTGC CACCTATTCA
AGTGCAACGA ATACAGATTT TGCTATCTGC ATTCAGTCGA TGCCTGTAAA AGCTAATGAT
GAATGTGCGG GTGCAGCTAC TATCACCCCT TCTCCGGTTT GCAATTTCAT TAACGGTGAT
TTAGCCGGCG CTTCCAGATC TGCATCCTCT CAACCAGTCG GCTGTGTTTC GCAGCAGGAT
ATCTTTTACA AATTTGTAGC TGCCTCTCCA AGTACAAGTA TCTATCTTAA CGGAAGCAGT
GATCTGGATT TAAAGGCAAC ATTGTATGCC AGCTGCCCTA CCAATACATC AACAATGTAT
TGTATTGACA ATACAGGTGT CGGTGGTTCT GAAGTCATGC ATGCCTATAA TTTAGTTGTT
GGCACCACGT ATTATCTCAG CGTAGGCAGT GCACGCGGTA ATCCGTCAAC AACGAATTTT
TCTGTATGTG TACAATCAAA TACAGTACCT GCAAACGATG AGTGTGCAAA TGCAACCGTT
ATAACACCAT CTGCTGCCTG CAATTATATT AACGGAGACC TGAACGGAGC AACAACATCC
GCTACCAATG GATGTCTGAT GGATCGGGAT ATTTTTTATC AGTTTACTGC TACTACTACC
AAAGCAAGCA TTACGTTAAC CAGCGGGGCC GGGTTAAATA TTTCTGCCGG ATTGTATGCC
AGCTGTACAG CTACTACACC ATTATATTGC AGCACAACTT CAAGTACTGT TTCTCCAAAA
ACTATTTCAG CGGCAAATTT AGTGATTGGC AATGTATACT ATATCAAAGT GGGAAGTTAC
AAGTACCTAA ATCCTACAAG TACAAGCTTT TCCCTATGCG TACAATTACC TCCAGTCAAT
GATGAATGTG CGGGTGCTAT TGCTGTTACC CCATCTGCAT CCTGCTCAAC AATTACCGGT
AATATACAGA CTGCTACTCA ATCTACGGCG AATGGCTGTA CCATGTACCA GGATGTGTTT
TATAAATTTG TTGCAACATC AGCAAGTACG GACATAACAT TTGACAAGGC TGCCGGATTC
AATCTGGTTG CTGCGTTATA TGATAATTGC ACGGCTACAA CTCCGCTCTA CTGCGCAACA
GGATATTATA CCAGCGCATG GGCTCAAAAA ATCAGCGCTA CAAATCTCAC CGTTGGCAAT
ACGTATTATA TCCGGGTAGG AAGTGCTTAC AGCACGGGTG CAACTGCCTA TGATTTCTCT
TTCTGTGTTC AGTCAATTGT CGTTCCGGTA AATGATAACT GTACAGGTGC AACTAACCTG
CCTGTTTCGG CAACCTGTAA TTATGTAGCA GGAAATTTAG CAGGAGCATC ACAATCAGCA
GCAAACGGCT GTACGATGTT CCAGGATATC TTTTACAAAT TCACCGCTAC GGCAACGAAC
ACAATGGTTT CATTTAACAG CAGCAGCGAT TTAAATTTAC TCGCAAGTAT CTATGCAGAC
TGTGCCGCAA CAACTCCGCT TTATTGTCTG ACTAATACCT ATAAAACCGG CGAAACTAAA
ACCATTGCAG CTACCAATCT GATTATTGGC AATACCTATT ACATTAAAGT AGGCAGTGCG
GCTGCTTCGC CCATCTCTTC TGCTTTTGAA ATCTGTGTTA AAAATTATGC ACCTGCTTCA
AACGACGAAA TAATCAATGC GACCAGCATA ACTCCATCTA CCACATGCAA CAATGTTTCG
GGTGATTTGG CAAATGCTTC CCATTCTCCC GCAAATGGCT GCGATATGTT AACGGATGTG
TTTTATAAAT TTGTTGCAGC ATCTCCTATT GCAAATATAT CAACAACACC GAGTTCAGGA
TTGCAACTAA CCATTGCTGT ATACGAAAGC ACAACAGCTA CATCGCCTAT GACTTGTGTG
AATTCTACCG CACCTGGTGC AGCAAGGCAA TTTGCAATTC AGAATTTAGT GCCCGGTAAT
ACTTACTATA TTAAACTAGG AAGCTATTTA TATGGCGCGC CTGCTACCAC TACGTTTGAC
GTATGTGTTC AGACAATGCA AATACCGGCA AACGATTTTT GTGCGGATGC AATTGAAATC
ACGCCGTCTG GTACCTGCTC GTATGTTAAC GGCGACTTAG CATTTTCAAA AGCGTCTGCG
CCAACTTCTT GCTCAAACAG CAATGTCCTG GATGTTTTTT ATAAGTTTAC CGCAACCGGA
CCTGGCGCAA GCATAAACGT TCAACCAAGT ACCGGGCTTG ACGTAGTATT AGCACTATTT
GACAATTGTG CGGCAACCAC ATCACTCTAT TGTACCAACA ACGGAGGAAC CGGCTCCGGT
GAAGTTTTTA CTGCAAGCAA CTTAATTACC GGAAACACTT ATTATATAAA AATATCTGGT
GCTACTTCTT ATTATACACC CACTACAACA TTTTCAATCT GCATCCAGAC GGCAATTTCA
TCGGCGAATG ATTTATGTGC GGATGCGATT ACACTTGTTT CAGGATCAAA CTGCAATGCT
GTTTCCGGTA ATTTATCCGG ATCAACAAGA TCCGCAACTA ATGGCTGCAT TATGACTACA
GATGTGTTTT ACAAATTCAT CGCAACGGCT GCCATTACTC AAATTGATTT AACAGCAAGT
GCTTCTTTGA ATATTACCGC GGCGTTATAT TCAGGCTGTT CAGAAACAAC TGCATTATAT
TGCGTACATG ACAGTTATGC ATATGGAAAC ACGGAAAAAC TGGTTGCTTC GAATTTAACG
GTAGGAAATA CGTATTATAT AAAAGTAGGA AGTTATACCA CCAATCCTGC TACAACTGAT
TTCACAATTT GTGTAAAATC TTTAACGCCG CGTGTAAATG ATGAATGTGT GAATGCAATA
TCTATTACGC CTTCATCGAC ATGCAATCCC ATTACTGCTG ATTTATTGGG CGCTACCCAA
TCAACACTTG CAGGCTGTAC AGCATATTCT GATATTTTTT ATAAATTTAT TGCAGCATCT
GAAGTAGCCA ATATTACATT TACTACAAGC CCGAATCTAA ATTTATCGAT TGGTGTATAC
GCAAGCTGCA ATGCAACAAC GGCTCTGTAT TGTGATAATG TTGGCCTGGG AAATACCAAA
ACAATTAATG CAACAGATCT GGTAATTGGT AATACGTATT ACATTAAAGC CGGTTCAAGA
AATGGCGGAT TGCTTTCCTC TACGTTTTCA ATTTGTGTAC AAACAATACA AAAACCTGCC
GCCGATGAAT GTGCCGGTGC GATAACCATT GTTCCTGCAC CGACCTGTAC CTATACCAAC
GGAGATTTAG CAACAGCGTC TCAATCTCCA GCTAATGGAT GTATTTCCTA CAAAGATGTC
TTTTATAAAT TTGTAGCCCA GACTTCTAAT ACAGACATTG CTTTTAGCGC CAGTACCGGG
TTATTCCTGG CTGTAAGTTT ACAAACCGAT TGTACCGGAT CAGCATTATA TTGTATAAAC
AATACCGTTG CAGGAGGTTC AAACATTATT TCAGCTACAA ACTTAACGGT AGGCAATACT
TACTTTATTA AAGTCGGAAG CACTATCGCA ACACCAACCA GCACGGAATT TTCTATTTGC
GTACGATCAG GCATGCCGGC TAATGATGAT TTAACAAATG CGTTGTCTGT TACGCCTGCA
ACTTCTTGTA TAACTACAGC CGGCAATCTG TTATATGCAA CATCATCCGC AACGAATGGT
TGTACCATGT ATAAAGATGT GTTTTATAAA TTTGTAGCCG GAGCGCCGCA TTATAAATTA
TCTTTTACGC CCGATGCAAA CCTGGATGTA ACAGCAGCCT TATATTCAGG CAATAGTACG
ACTCCGTTAG TGTGTGTAAA TAACGCAGGC AACGGCGGAC TGGAAACTAT CAGAGCGCTT
GATTTAACAA TAGGCAGTAC GTACTATATT AAAGTAGGAA GCTATACAAA TACGCCTGTT
TCAAATACAT TTTCTTTCTG CATCGAGAAA ATTCAGGCTA GCAATGATGA ATGCGCTACA
GCGATTTCCG TTACGCCAGC CACAACATGT ACGTATATAA CAGGAGATTT AGCTATTGCT
ACTAAATCTT TATTAAATGG TTTTGATCAA GGGAAAGATG TATTTTATAA ATTTGTTGCG
AATTCTAATG CAGTTACCAT AACTGCCGCT GTACAAGGTA ATTCTCATGT TGGTATAAAT
TTATTATCCA GCTGTACTAA AAAAGTCTAC AGTGATTCAG ACACCATGTA TGTTCATAAC
CTGGTTATCG GCAATACATA TTATATCCAA TTAACGACAA GTATTTACGA TACAAATTCT
GAATTTTCGT TATGTATCCA ATCCATAACA AATCCTGAAA ACGATGAATG TGCAAATGCT
ATTTTAATAC CTGCATCTTT CATTCGAAAA AGCGTTGGCG AAACTATTTT TGCGGACTTA
TCTCTGGCGA CAAAATCTGT TCAGACGAGT TGTTCGCAGG TTATATATAA AGACCGGTTT
TATAAGTTTG TTGCAAAATC TGCAACACTT ATCATGAATT ACAACAATTC GTTTAACCTG
TTTTCAGGAC TTACCCTTGG TTGCGGTACC AACGCTGAAC TTAAGCTTTG CGGCACAAAC
ACCTATGGAG GAAATGCCTG GGGTATTTTC AATATGGTTG TTGGAGAAAC GTATTATTTA
AGACTCGGCA CATTAGATAG TGCACCTTCC GAGAGCACAT TTAGTTTCAG CCTTGGTTAT
ATTCCGGACG AACCTCTTCC GGTAAATGAT GAATGTGCCG GAGCACTAAC ACTTGTTCCG
AATATGACAC GTTCGTTTAC TCAAGGCGAT TTAAGAGGTG CGCTCAGATC TAACGTATTA
AATGATGGCT GTTACGCAGG CATTAAAGAT GCGTTTTATA AATTTGTAGC TACAGCATCC
ACTGCTAAAA TCGTTTTCAA ACAGAATTCT TCTGTAGACT TCCAGCTCTC TCTAAATGGT
AGTTGTCCGG CAACTCCGGC AAACGCTTTA TATTGCAAGT CTATTACTTC TACTTCAGAT
AGTATTATGG CCACGAATCT GACTGTTGGG AAAACATATT ATATCAAACT GGGCTGTAAC
CAGGCACATG GTGATCTCAA CAGTTTCTCT ATACTGGTAG AAGCAGTTGC ACCCTATGTG
CCACCGGTTG CTAATGATGA ATGTCCGGGA GCATTCACAC TTACTCCAAC AACGGTAAGA
AATCTTACAA AGGGCAATTT TATAAACGCG CTTCAATCCG GATCAAGCAC GGGCTGCTCT
GCAGCGAGAG ATGTATTTTA TAAATTTGTG GCTAATACAA ATGCTGCTAA AATATTTTTT
ACAAATCCTG CTGGTCATAC ATTATCTGTC GGACTATATT CAAATTGTCC GGCAACAACC
AATTTATATT GTGAACTCGG GAGCATGTCA GACAGTATTA TAGCTTCTAA TCTTACCATA
GGAAACACCT ATTACATTAA GGTTGGTTCT AATGCATTAA CATCTGACAC CAACAGTTTC
TACTTATTTG TGGAATCATT AGCACCAGCC GCTAACGATG AATGTGTGAA TGCCCTTTCA
ATAATACCTT CATTCACCTG TAATACCATG TCAGGAGATT TAGCACGGGC AACGCAATCG
GCTTCTAATG GCTGTACCAG CTATAGTGAT GTGTTTTACA AGTTTGTTGC CAGCAGCGAA
GAAGTGAAGA TTTCATATAC AGGAAGTACA TTTTTACAGC TTGCCGTTGG GGTGTATCCT
TCCTGCAATG CCTCTGCGCC TGCATTATTT TGTATTCCCA ATACAATAAA AGGCGGATCG
GATGTGCTTA CAGCTTCCAG CCTGACTATT GGCAACACCT ATTATATAAA GATGGGCAGC
AGTGTACCCG GCAATCTATT ATCTACAACA TTTACGGTAT GTGTACAAAA CACTAAAGCG
GTAAATGATG AATGTGCTAA TGCACTTCCG TTAACTCCTT CTCCAAACAT ACAATTCGTT
TCCGGAGACC TGATTAATGC CAGTAAGTCA TTATTATTCT CATCTGCCTG CACACGTGAA
ACAGATCTCT TCTACAAATT CACAGCAAAC AGCAGCAGTA TGAAAATCAT ATTAGAAAGT
TCTGCGGGAT TAGATGCTGT TGTTTCCGTA GCCACTTCCT GTTCTGCTTC ATCGGATATT
ACATGCCAGA ATAATACTGG CGTTGGCGAA TTAGAAGAAG TCGTGCTTTC ATCCTTAACA
CCTGGTGTAA CGTATTACGT TATGGTTGGC AATGCAGTAT CAAACACAAG TACAGCCAGA
ACAAATGTAT CTGCCACCTC TACCTTTAGA ATTGCTCTCC AGGAAATGGG TATCACTACT
GATGTTTCAA CAAACCAGGC ATTAAAGAAT ATTACTATTT ATCCAAATCC CTCTTATGGA
AATGTGCATT TTTCAAACAT CACGGGATTT ACACAAATAG AAGTAATGAG TATAGAAGGC
AAAATACTGT TTACAAAAGA ACTTTCTTCA GATGCTTCCA TCAATATGGA AACACTGTCT
TCAGGTATCT ATATGCTGCG GCTTATATAC AATGACATCT CTGAAATAAG ACGTGTCGAA
ATTATTAAAT AA
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| Protein sequence | MKNLFLLPLL LLTHLVFAQA PANDECIQAI TLTPSATRTY LPADLASATQ SSPNGCVTYM
DVFYKYVATS AINVISVTPG SGLDISLSLY SSCSAATPIT CSNAYSYNGS ETIIATNQVI
GNTYYVKVGS ANSTKPNNTT FSICVVIPPV NTTCDGAINI TPSTTACSYT NGNLTEALYS
NYSCGMNQSV FYKFTATSPS TEITLTTSAT FDVSAALYSS CNASSLLYCI NLNPGSGERI
SAANLTVGNT YYVQVGATYS SATNTDFAIC IQSMPVKAND ECAGAATITP SPVCNFINGD
LAGASRSASS QPVGCVSQQD IFYKFVAASP STSIYLNGSS DLDLKATLYA SCPTNTSTMY
CIDNTGVGGS EVMHAYNLVV GTTYYLSVGS ARGNPSTTNF SVCVQSNTVP ANDECANATV
ITPSAACNYI NGDLNGATTS ATNGCLMDRD IFYQFTATTT KASITLTSGA GLNISAGLYA
SCTATTPLYC STTSSTVSPK TISAANLVIG NVYYIKVGSY KYLNPTSTSF SLCVQLPPVN
DECAGAIAVT PSASCSTITG NIQTATQSTA NGCTMYQDVF YKFVATSAST DITFDKAAGF
NLVAALYDNC TATTPLYCAT GYYTSAWAQK ISATNLTVGN TYYIRVGSAY STGATAYDFS
FCVQSIVVPV NDNCTGATNL PVSATCNYVA GNLAGASQSA ANGCTMFQDI FYKFTATATN
TMVSFNSSSD LNLLASIYAD CAATTPLYCL TNTYKTGETK TIAATNLIIG NTYYIKVGSA
AASPISSAFE ICVKNYAPAS NDEIINATSI TPSTTCNNVS GDLANASHSP ANGCDMLTDV
FYKFVAASPI ANISTTPSSG LQLTIAVYES TTATSPMTCV NSTAPGAARQ FAIQNLVPGN
TYYIKLGSYL YGAPATTTFD VCVQTMQIPA NDFCADAIEI TPSGTCSYVN GDLAFSKASA
PTSCSNSNVL DVFYKFTATG PGASINVQPS TGLDVVLALF DNCAATTSLY CTNNGGTGSG
EVFTASNLIT GNTYYIKISG ATSYYTPTTT FSICIQTAIS SANDLCADAI TLVSGSNCNA
VSGNLSGSTR SATNGCIMTT DVFYKFIATA AITQIDLTAS ASLNITAALY SGCSETTALY
CVHDSYAYGN TEKLVASNLT VGNTYYIKVG SYTTNPATTD FTICVKSLTP RVNDECVNAI
SITPSSTCNP ITADLLGATQ STLAGCTAYS DIFYKFIAAS EVANITFTTS PNLNLSIGVY
ASCNATTALY CDNVGLGNTK TINATDLVIG NTYYIKAGSR NGGLLSSTFS ICVQTIQKPA
ADECAGAITI VPAPTCTYTN GDLATASQSP ANGCISYKDV FYKFVAQTSN TDIAFSASTG
LFLAVSLQTD CTGSALYCIN NTVAGGSNII SATNLTVGNT YFIKVGSTIA TPTSTEFSIC
VRSGMPANDD LTNALSVTPA TSCITTAGNL LYATSSATNG CTMYKDVFYK FVAGAPHYKL
SFTPDANLDV TAALYSGNST TPLVCVNNAG NGGLETIRAL DLTIGSTYYI KVGSYTNTPV
SNTFSFCIEK IQASNDECAT AISVTPATTC TYITGDLAIA TKSLLNGFDQ GKDVFYKFVA
NSNAVTITAA VQGNSHVGIN LLSSCTKKVY SDSDTMYVHN LVIGNTYYIQ LTTSIYDTNS
EFSLCIQSIT NPENDECANA ILIPASFIRK SVGETIFADL SLATKSVQTS CSQVIYKDRF
YKFVAKSATL IMNYNNSFNL FSGLTLGCGT NAELKLCGTN TYGGNAWGIF NMVVGETYYL
RLGTLDSAPS ESTFSFSLGY IPDEPLPVND ECAGALTLVP NMTRSFTQGD LRGALRSNVL
NDGCYAGIKD AFYKFVATAS TAKIVFKQNS SVDFQLSLNG SCPATPANAL YCKSITSTSD
SIMATNLTVG KTYYIKLGCN QAHGDLNSFS ILVEAVAPYV PPVANDECPG AFTLTPTTVR
NLTKGNFINA LQSGSSTGCS AARDVFYKFV ANTNAAKIFF TNPAGHTLSV GLYSNCPATT
NLYCELGSMS DSIIASNLTI GNTYYIKVGS NALTSDTNSF YLFVESLAPA ANDECVNALS
IIPSFTCNTM SGDLARATQS ASNGCTSYSD VFYKFVASSE EVKISYTGST FLQLAVGVYP
SCNASAPALF CIPNTIKGGS DVLTASSLTI GNTYYIKMGS SVPGNLLSTT FTVCVQNTKA
VNDECANALP LTPSPNIQFV SGDLINASKS LLFSSACTRE TDLFYKFTAN SSSMKIILES
SAGLDAVVSV ATSCSASSDI TCQNNTGVGE LEEVVLSSLT PGVTYYVMVG NAVSNTSTAR
TNVSATSTFR IALQEMGITT DVSTNQALKN ITIYPNPSYG NVHFSNITGF TQIEVMSIEG
KILFTKELSS DASINMETLS SGIYMLRLIY NDISEIRRVE IIK
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