| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0405 |
|---|
| Symbol | |
|---|
| ID | 4184239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 474703 |
|---|
| End bp | 475419 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638070413 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_677035 |
|---|
| Protein GI | 110636828 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1408] Predicted phosphohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0600873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.787611 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAG AGATTGGATA CAACCATCCG TTTGAAATTC GAAAAGAGCG GTACGAAAGT
GACCATGTAT GCAACTTTAG TGTTTTGTAC ATTTCAGATT TACATCTCAC TGTTTTTTCA
AAAGATATCT GCACACGTTT ATCAAAGTGC ATTCAGGAGT TAAACCCGAC TATTATTATA
TTAGGAGGTG ATTATATAGA TTGCAGAAAC GGCTGGGATT ATTTAAGCAC CTTTTTCAAG
TTCTTATCTG CACGAAAAAA TGTTTTTTCC ATTGCAGGAA ATCATGATTA TTTCTATGGA
ATTGATGAAA TAAAAAAACT AATTGAAAGC AATAATATAC ACTGGCTGGA AAATCAGTCT
GCCGTTGTCA ACATTCAGGA GTACAACATT CTATTAACCG GAAACAATGA AACCCAGTCA
AGCATACCTG CCGACTTTAA TATTTTATGT CTGCATAAAC CCGTATCGCT GGATGCATTT
AAAATTCCAT ACCACATTGC ATTCGCAGGG CATCTACACG GATGCCAATG CGTTTTCTGG
CAGAATGAAA ATGGCTTGTA CCCGGGAAGA TTTTTTTATA CATTCAATTT TTTACGTAGA
CAGGTAAAGA ATTGTCTTTA TCTTATCAGT AAAGGTTTAG GAGATACGCT GCCTATCCGC
TTTAATTGTA AAAAGGATAT TATATTCGTT GAAATTAAAA ATAACAGTAA CAAATGA
|
|---|
| Protein sequence | MKLEIGYNHP FEIRKERYES DHVCNFSVLY ISDLHLTVFS KDICTRLSKC IQELNPTIII
LGGDYIDCRN GWDYLSTFFK FLSARKNVFS IAGNHDYFYG IDEIKKLIES NNIHWLENQS
AVVNIQEYNI LLTGNNETQS SIPADFNILC LHKPVSLDAF KIPYHIAFAG HLHGCQCVFW
QNENGLYPGR FFYTFNFLRR QVKNCLYLIS KGLGDTLPIR FNCKKDIIFV EIKNNSNK
|
|---|
| |