| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0353 |
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| Symbol | |
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| ID | 4186220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 421644 |
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| End bp | 424091 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638070361 |
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| Product | beta-mannanase |
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| Protein accession | YP_676983 |
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| Protein GI | 110636776 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4124] Beta-mannanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.3888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.500644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGTAG TTTTACCTCC AAAAATCTAT AAAAATATTT TCCTGATTGC GGCAAGCTGC
ATGATGTTAT TCCATAACCG ATTCTCGCTT GCTCAGACGT TGGTAACGAC CGTTGAAGCA
GAAAGTGGTA CACGAGCCGG CGGACTTACC ATAGCAACTG CAAATGCAGG ATATTCGGGT
ACAGGGTATA TAACGAACAT GACTTCTGCC GCGGATAAAT TAACTATCCC CGTTACCGTA
CCGAGTGCAG GCAATTACCA ATTGGTGATT CGATACAATG GTCCATATGG CCCAAAAGAT
CAGGATATAT ACGTTAATGG TGTATTCGTT TCCTCTTTAC ATTTCCCTGA AACAACCGGA
TATACAGATT TAACAGCTGG AAGTTTAACA TTAAATGCAG GTGCAAACAC AATAGGCATT
TATAAGAATT GGGGATATAC AGATTTTGAT AAAATCAGTT TGTTTACGGT TCCGCTTCAT
GATTATTCAA CGGTAGCCCC CAACTTAATT GATGCGAATG CAACACCCGA AGCAAAGGCT
TTATATAACT ATATCAAAGC CGGATATGGC ACCCGGATCA TTTCCGGACA GACGTCAGAT
TATTACAATA CGGTATCTCC AAATGCTGCC AAAAAGCCGG TAATAAGAGC ATACGATTTT
CAGCATTATA CAGTAGGGTA TTCGTATTTA TGGAATAACG CAACGGCAAG CCATACATTT
GGCTGGGAAG ATGACGGTAC CACGCAGGCT GCCATTGATT GGTATAACAG TACTTGCCAG
AAGGGAATGG TTGCCTTTCA TTGGCACTGG CACTCTCCAT CCGGAGGGCA AGCAGGTACG
AACACGTTTT ACACGAATTC AACAGCTTTT GATGTAACCA AAGCAGTTAC GCAGGGAACC
CCTGAATATA CGGCAGTAAT ACGTGATATT GATTCCATTG CAACACAACT GAAGCGCCTG
CAGGCGGCAG GTGTACCCGT ATTATGGCGT CCTTTGCACG AAGCCGGAGG TGCATGGTTC
TGGTGGGGAG CCAAAGGACC GGCTGCAGCA TTAGCCTTAT ATGATATGGT TTACAACCGC
ATTGTTAATT ATCACAACAT TCATAATCTG ATCTGGCAAT GGTCCACACC AGAAGCCAAC
TGGTATCCGG GCAATAGTAA GGTGGATATG TTGGGATATG ATTCGTATCC GGGTGCATAT
AATTACGGAA CGCAGAAATT AATTTTTGAT CAGTTGTATA CAATCGTAAA TGGACAAAAA
ATTCTGGCGA TGACAGAGAA CGGACCCATA CCGGATCCGG ATCTGTGTTT TAGCAGTGAT
GCCAAATGGG CGTACGTTAT GTCGTGGAGT GATTTGGTTA CGCAACAAAA TTCAAGTGCT
CAGTTAAATT TAGTATACAA TCACGCAAAG GTGCTGACGC TCGATGAAGT AACAACCGCT
ACGAATACGG CTCAGTTAAC GGCTGCCGGC CCTGCTGCCA TCTGTACAGG CGGAAGTGTT
TTATTAAAAG CAAATACTGC AAAAGGGTAT ACATACAAAT GGTATAACGG TACAAACCTG
ATTACGGGAT CAACAAGTTC TGCATATACA GCAACAACCG CAGGCTCTTA TACAGTAACG
GTTACCGCAA CAGGTGCGTG TACAACAACT TCAGCGCCGT TAGCCGTTAC TTCCGCTATG
CCAGCAGTTC TTATAACACC TGCTTCAGCT ACCACCTTCT GCCAGGGAGA AAATGTGAAA
TTAAATGCAT CAACAGGTGC CGGATATACG TATCAATGGA AGATTGGTGG CGTGGCGGTT
GCCGGAAGTA CGTCTTCTTC CTATACAGCA ACTTCCGGCG GTTCTTACAC GGTAGAAGTA
ACAAGTGGAG CAGGCTGCAA GGATACATCG CCTGGTACAG ATGTTGTGGT AACATCGCCT
TCTATCTGGT ATGCAGATAC AGATGGAGAT GGTGCAGGAG ATCCGGCGGT TACAAAAACT
GCTTGCGCAA AACCTGCAAA CTATGTGGCA ACAGCCGGTG ATGCCTGCCC GAATGATGCA
AATAAAACCG CTGCGGGCAA TTGCGGCTGT AACAAAACAG AAGCCAGCTG CCTGGATTGT
ATGGGTGTGC CAAACGGCAC TGCTGCACTG GATGTGTGTA ACCAATGTGC AGGTGGAACT
TCAGATATTA CACCTAAAAC AAACATTTCA CAGTGTACAA CTACTTCTGC TGTAGCTGCA
TTTGCTTCAA CTATAAAAAT GTATCCGAAT CCTACAGCAG TTGACTGCCA TATTCAGTTG
CCTGGTAATG CATTCAACGT TGTTATTTAT AATGGAGCCG GCACAGCAGT TTTCAATAAG
ACGTTTGAAA ACGAAGCTGT TGTTGGAGCA GAGTTACCTC AAGGTATATA CCTGGTGCGG
ATTGAACAGG ATGGAAATAT AGAACTTAAG AAACTGATTA AAGAGTAG
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| Protein sequence | MLVVLPPKIY KNIFLIAASC MMLFHNRFSL AQTLVTTVEA ESGTRAGGLT IATANAGYSG
TGYITNMTSA ADKLTIPVTV PSAGNYQLVI RYNGPYGPKD QDIYVNGVFV SSLHFPETTG
YTDLTAGSLT LNAGANTIGI YKNWGYTDFD KISLFTVPLH DYSTVAPNLI DANATPEAKA
LYNYIKAGYG TRIISGQTSD YYNTVSPNAA KKPVIRAYDF QHYTVGYSYL WNNATASHTF
GWEDDGTTQA AIDWYNSTCQ KGMVAFHWHW HSPSGGQAGT NTFYTNSTAF DVTKAVTQGT
PEYTAVIRDI DSIATQLKRL QAAGVPVLWR PLHEAGGAWF WWGAKGPAAA LALYDMVYNR
IVNYHNIHNL IWQWSTPEAN WYPGNSKVDM LGYDSYPGAY NYGTQKLIFD QLYTIVNGQK
ILAMTENGPI PDPDLCFSSD AKWAYVMSWS DLVTQQNSSA QLNLVYNHAK VLTLDEVTTA
TNTAQLTAAG PAAICTGGSV LLKANTAKGY TYKWYNGTNL ITGSTSSAYT ATTAGSYTVT
VTATGACTTT SAPLAVTSAM PAVLITPASA TTFCQGENVK LNASTGAGYT YQWKIGGVAV
AGSTSSSYTA TSGGSYTVEV TSGAGCKDTS PGTDVVVTSP SIWYADTDGD GAGDPAVTKT
ACAKPANYVA TAGDACPNDA NKTAAGNCGC NKTEASCLDC MGVPNGTAAL DVCNQCAGGT
SDITPKTNIS QCTTTSAVAA FASTIKMYPN PTAVDCHIQL PGNAFNVVIY NGAGTAVFNK
TFENEAVVGA ELPQGIYLVR IEQDGNIELK KLIKE
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