| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_0313 |
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| Symbol | rsaD |
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| ID | 4186879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 377074 |
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| End bp | 378846 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638070322 |
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| Product | ABC transporter, ATP-binding/membrane-spanning protein |
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| Protein accession | YP_676944 |
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| Protein GI | 110636737 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAAAAG AGGAAAGCGG TGTCGTAAGC GGCAATTTAT TTGATATACA TATTTTAAGT
AGATTATTTC AATTTGTAAA ACCTTACAAA AATCTATTTT ACACACAGGT AGCTTTAACC
CTTACAGGAG CAGTACTTGC ATCGGTAAAA CCGTATTTAG TTAAAGTTGC CATTGACGAT
AAAATTGCCA GCCATGACCT GAATGGTTTG TATGTAATGA TTGGCTTAAT GGTTGTGGTG
TTAGTTGCGC AGGCATTCAT GCAGTATTTT GATACCTATC TGGCAGGCAA ACTCGGACAG
ACAATTATTC GCGATATCCG AATCCGTTTA TTCAAACATT TATTAAAATT CCGTTTGGGC
TTTTTTGACA AAACACCTAT CGGCCGTTTG GTAACCCGCA ACATATCAGA CATTGAAACA
CTTTCGAATT TTACATCCGA CGGATTAGCA GGCATTCTGG GCGATTTCCT TCAGTTGATT
TTCATCTTTG GTTTTATGCT GTATATCGAT TGGCGTTTAA CGCTGATCTG TTTGTGTCCG
CTGCCAATCT TATTATTCAG TACCTATGTA TTTAAGGAAC GCATCAAACA TTCGTTCAAC
GAAGTGCGTA TTGCCGTTTC CAATCTCAAC ACCTTTGTTC AGGAGCATAT TACCGGAATG
AGTATTGTTC AGATCTTTAA CAGCGAACAA CGCGAATATG CGAAATTCAA AAAGATCAAT
ATTGAACACC GCGATTCAAA TTTAAAATCG GTAAACGCAT ACTCTGTTTA TTTTCCGATT
GCTGAATTTA TCGGATCGCT GGGACTGGTA CTTCTAATAT GGTTTGGTTC TACACTGGTA
TTAGGCGAAA CAAGTTCTTT CGGAACGCTC GTTTCATTTA TCATGTACAT CTCTATGTTC
TTCCGCCCCA TACGCATGAT CGCAGACCGC TTCAATACAT TGCAATTATC TGTTGTAAGT
TCAGACCGTA TCTTAAAATT ATTAGACGAC CATACGCCCA TTCAGTCAAC CGGAGAAAAA
CCGTTGCCTG AAATTAAAGG AGATGTGCAG TTCAATAATG TTTTCTTCAG CTACATCGAA
GGGCAAACGG TACTAAAAGA TATTAATTTC CATGTTCCGC AGGGCGGAAG TATTGCCTTT
GTAGGTTCAA CCGGTGCGGG CAAATCTTCG ATCATCAATT TGCTGAATCG TTTTTATGAT
ATCGAAAAAG GGCATATCCT TATTGATGGT ACCGATATCC GTGATTATAA TCTGCATGAA
CTGCGTTTAC AGATTGGTTT GGTATTACAG GATGTGTTTT TATTTTCAGG GAGTATCCGT
AATAATATCA CGCTCTATAA CCCAGACATC ACAGATGAAA AAATATGGGA AGCTATCCGT
ATGGTTGGCG CAGAACGTTT CATAGAGCGT TTACCCGGAG GGCTGGATTA TGAAGTAATG
GAGCGCGGCA GCACCCTTTC TTCCGGTCAG CGCCAGATTA TTTCCTTTAT CCGTGTAATG
GTTTATGATC CTAAAATATT AATTCTGGAT GAAGCTACTT CTTCTATTGA TTCTGAAACA
GAAGAACTGA TTCAGGAAGC AACGGCAAAA ATAATGCTGG GCAGAACGTC TATTATTATT
GCACACCGCT TATCAACGAT ACAGCACGTG GATACAATTT TTGTATTGGA AAAAGGCGAA
ATAGTAGAAT CCGGTTCGCA TGAAGTGCTG TTAGGCCAGC AGGGGCTTTA CAGCCAGCTC
AGCGCGCTGC AGTACGCGGC AGCAAAAGAG TAA
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| Protein sequence | MQKEESGVVS GNLFDIHILS RLFQFVKPYK NLFYTQVALT LTGAVLASVK PYLVKVAIDD
KIASHDLNGL YVMIGLMVVV LVAQAFMQYF DTYLAGKLGQ TIIRDIRIRL FKHLLKFRLG
FFDKTPIGRL VTRNISDIET LSNFTSDGLA GILGDFLQLI FIFGFMLYID WRLTLICLCP
LPILLFSTYV FKERIKHSFN EVRIAVSNLN TFVQEHITGM SIVQIFNSEQ REYAKFKKIN
IEHRDSNLKS VNAYSVYFPI AEFIGSLGLV LLIWFGSTLV LGETSSFGTL VSFIMYISMF
FRPIRMIADR FNTLQLSVVS SDRILKLLDD HTPIQSTGEK PLPEIKGDVQ FNNVFFSYIE
GQTVLKDINF HVPQGGSIAF VGSTGAGKSS IINLLNRFYD IEKGHILIDG TDIRDYNLHE
LRLQIGLVLQ DVFLFSGSIR NNITLYNPDI TDEKIWEAIR MVGAERFIER LPGGLDYEVM
ERGSTLSSGQ RQIISFIRVM VYDPKILILD EATSSIDSET EELIQEATAK IMLGRTSIII
AHRLSTIQHV DTIFVLEKGE IVESGSHEVL LGQQGLYSQL SALQYAAAKE
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